RNA–Protein interactions for RNA: ENST00000530062.5

PDE4DIP-228, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 1,076 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-228ENST00000530062 NISCHQ9Y2I1 1504 aa13.65□□□□□ -0.22
PDE4DIP-228ENST00000530062 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
PDE4DIP-228ENST00000530062 ABCC9O60706 1549 aa11.92□□□□□ -0.5
PDE4DIP-228ENST00000530062 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
PDE4DIP-228ENST00000530062 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
PDE4DIP-228ENST00000530062 NACADO15069 1562 aa11.45□□□□□ -0.58
PDE4DIP-228ENST00000530062 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
PDE4DIP-228ENST00000530062 ZCCHC6Q5VYS8 1495 aaKnown RBP11.35□□□□□ -0.59
PDE4DIP-228ENST00000530062 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
PDE4DIP-228ENST00000530062 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
PDE4DIP-228ENST00000530062 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDE4DIP-228ENST00000530062 SCRIBQ14160 1630 aa11.08□□□□□ -0.64
PDE4DIP-228ENST00000530062 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
PDE4DIP-228ENST00000530062 SHROOM4Q9ULL8 1493 aa11.01□□□□□ -0.65
PDE4DIP-228ENST00000530062 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
PDE4DIP-228ENST00000530062 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
PDE4DIP-228ENST00000530062 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
PDE4DIP-228ENST00000530062 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
PDE4DIP-228ENST00000530062 BAZ1AQ9NRL2 1556 aaPredicted RBP10.6□□□□□ -0.71
PDE4DIP-228ENST00000530062 SMARCA4P51532 1647 aa10.59□□□□□ -0.71
PDE4DIP-228ENST00000530062 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
PDE4DIP-228ENST00000530062 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
PDE4DIP-228ENST00000530062 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
PDE4DIP-228ENST00000530062 HMGXB3Q12766 1538 aa10.5□□□□□ -0.73
PDE4DIP-228ENST00000530062 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
PDE4DIP-228ENST00000530062 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
PDE4DIP-228ENST00000530062 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
PDE4DIP-228ENST00000530062 WIZO95785 1651 aa10.39□□□□□ -0.75
PDE4DIP-228ENST00000530062 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
PDE4DIP-228ENST00000530062 ERCC6Q03468 1493 aa10.32□□□□□ -0.76
PDE4DIP-228ENST00000530062 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
PDE4DIP-228ENST00000530062 TOP2AP11388 1531 aaKnown RBP10.29□□□□□ -0.76
PDE4DIP-228ENST00000530062 NESP48681 1621 aa10.29□□□□□ -0.76
PDE4DIP-228ENST00000530062 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
PDE4DIP-228ENST00000530062 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
PDE4DIP-228ENST00000530062 CUX2O14529 1486 aa10.21□□□□□ -0.78
PDE4DIP-228ENST00000530062 CFTRP13569 1480 aa10.18□□□□□ -0.78
PDE4DIP-228ENST00000530062 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
PDE4DIP-228ENST00000530062 KIF21AQ7Z4S6 1674 aa10.16□□□□□ -0.78
PDE4DIP-228ENST00000530062 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
PDE4DIP-228ENST00000530062 FANCD2Q9BXW9 1451 aa10.14□□□□□ -0.79
PDE4DIP-228ENST00000530062 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
PDE4DIP-228ENST00000530062 THOC2Q8NI27 1593 aaKnown RBP10.14□□□□□ -0.79
PDE4DIP-228ENST00000530062 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
PDE4DIP-228ENST00000530062 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
PDE4DIP-228ENST00000530062 WDR62O43379 1518 aa10.07□□□□□ -0.8
PDE4DIP-228ENST00000530062 URB2Q14146 1524 aaKnown RBP10.01□□□□□ -0.81
PDE4DIP-228ENST00000530062 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
PDE4DIP-228ENST00000530062 TOPBP1Q92547 1522 aa9.96□□□□□ -0.82
PDE4DIP-228ENST00000530062 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
PDE4DIP-228ENST00000530062 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
PDE4DIP-228ENST00000530062 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
PDE4DIP-228ENST00000530062 POLA1P09884 1462 aaPredicted RBP9.87□□□□□ -0.83
PDE4DIP-228ENST00000530062 SOGA1O94964 1423 aa9.86□□□□□ -0.83
PDE4DIP-228ENST00000530062 CUX1P39880 1505 aa9.86□□□□□ -0.83
PDE4DIP-228ENST00000530062 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
PDE4DIP-228ENST00000530062 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
PDE4DIP-228ENST00000530062 TARBP1Q13395 1621 aaKnown RBP9.84□□□□□ -0.83
PDE4DIP-228ENST00000530062 RAD54L2Q9Y4B4 1467 aa9.83□□□□□ -0.84
PDE4DIP-228ENST00000530062 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
PDE4DIP-228ENST00000530062 EIF4G3O43432 1585 aaKnown RBP9.81□□□□□ -0.84
PDE4DIP-228ENST00000530062 AQRO60306 1485 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDE4DIP-228ENST00000530062 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
PDE4DIP-228ENST00000530062 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
PDE4DIP-228ENST00000530062 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
PDE4DIP-228ENST00000530062 TOP2BQ02880 1626 aa9.78□□□□□ -0.84
PDE4DIP-228ENST00000530062 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
PDE4DIP-228ENST00000530062 FBLN2P98095 1184 aa9.76□□□□□ -0.85
PDE4DIP-228ENST00000530062 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
PDE4DIP-228ENST00000530062 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
PDE4DIP-228ENST00000530062 GRIN2BQ13224 1484 aa9.74□□□□□ -0.85
PDE4DIP-228ENST00000530062 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
PDE4DIP-228ENST00000530062 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
PDE4DIP-228ENST00000530062 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
PDE4DIP-228ENST00000530062 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
PDE4DIP-228ENST00000530062 ABCA5Q8WWZ7 1642 aa9.7□□□□□ -0.86
PDE4DIP-228ENST00000530062 CHD1O14646 1710 aa9.69□□□□□ -0.86
PDE4DIP-228ENST00000530062 PBRM1Q86U86 1689 aa9.69□□□□□ -0.86
PDE4DIP-228ENST00000530062 SYNJ2O15056 1496 aa9.68□□□□□ -0.86
PDE4DIP-228ENST00000530062 ERICH3Q5RHP9 1530 aa9.64□□□□□ -0.87
PDE4DIP-228ENST00000530062 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
PDE4DIP-228ENST00000530062 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
PDE4DIP-228ENST00000530062 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
PDE4DIP-228ENST00000530062 ADAMTS12P58397 1594 aa9.61□□□□□ -0.87
PDE4DIP-228ENST00000530062 GRIN2AQ12879 1464 aa9.6□□□□□ -0.87
PDE4DIP-228ENST00000530062 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
PDE4DIP-228ENST00000530062 RIMBP3CA6NJZ7 1639 aa9.6□□□□□ -0.87
PDE4DIP-228ENST00000530062 RIMBP3BA6NNM3 1639 aa9.6□□□□□ -0.87
PDE4DIP-228ENST00000530062 RIMBP3Q9UFD9 1639 aa9.6□□□□□ -0.87
PDE4DIP-228ENST00000530062 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
PDE4DIP-228ENST00000530062 IGF1RP08069 1367 aa9.57□□□□□ -0.88
PDE4DIP-228ENST00000530062 NUP160Q12769 1436 aa9.56□□□□□ -0.88
PDE4DIP-228ENST00000530062 CUL7Q14999 1698 aa9.55□□□□□ -0.88
PDE4DIP-228ENST00000530062 CYB5RLQ6IPT4 315 aa9.55□□□□□ -0.88
PDE4DIP-228ENST00000530062 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
PDE4DIP-228ENST00000530062 CARMIL1Q5VZK9 1371 aa9.53□□□□□ -0.88
PDE4DIP-228ENST00000530062 JPH4Q96JJ6 628 aa9.5□□□□□ -0.89
PDE4DIP-228ENST00000530062 ARAP1Q96P48 1450 aa9.5□□□□□ -0.89
PDE4DIP-228ENST00000530062 RUSC2Q8N2Y8 1516 aa9.47□□□□□ -0.89
PDE4DIP-228ENST00000530062 KIAA0586Q9BVV6 1533 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms