RNA–Protein interactions for RNA: ENST00000529948.1

RAET1E-205, retinoic acid early transcript 1E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAET1E, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-205ENST00000529948 NISCHQ9Y2I1 1504 aa21.66■■□□□ 1.06
RAET1E-205ENST00000529948 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
RAET1E-205ENST00000529948 ABCC9O60706 1549 aa18.52■□□□□ 0.56
RAET1E-205ENST00000529948 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
RAET1E-205ENST00000529948 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
RAET1E-205ENST00000529948 NACADO15069 1562 aa18.02■□□□□ 0.48
RAET1E-205ENST00000529948 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
RAET1E-205ENST00000529948 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
RAET1E-205ENST00000529948 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
RAET1E-205ENST00000529948 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
RAET1E-205ENST00000529948 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
RAET1E-205ENST00000529948 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
RAET1E-205ENST00000529948 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
RAET1E-205ENST00000529948 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
RAET1E-205ENST00000529948 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
RAET1E-205ENST00000529948 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
RAET1E-205ENST00000529948 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
RAET1E-205ENST00000529948 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
RAET1E-205ENST00000529948 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
RAET1E-205ENST00000529948 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
RAET1E-205ENST00000529948 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
RAET1E-205ENST00000529948 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
RAET1E-205ENST00000529948 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
RAET1E-205ENST00000529948 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
RAET1E-205ENST00000529948 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
RAET1E-205ENST00000529948 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
RAET1E-205ENST00000529948 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
RAET1E-205ENST00000529948 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
RAET1E-205ENST00000529948 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
RAET1E-205ENST00000529948 WIZO95785 1651 aa16.51■□□□□ 0.23
RAET1E-205ENST00000529948 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
RAET1E-205ENST00000529948 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
RAET1E-205ENST00000529948 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
RAET1E-205ENST00000529948 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
RAET1E-205ENST00000529948 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
RAET1E-205ENST00000529948 CUX2O14529 1486 aa16.1■□□□□ 0.17
RAET1E-205ENST00000529948 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
RAET1E-205ENST00000529948 CFTRP13569 1480 aa16.05■□□□□ 0.16
RAET1E-205ENST00000529948 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
RAET1E-205ENST00000529948 NESP48681 1621 aa16.05■□□□□ 0.16
RAET1E-205ENST00000529948 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
RAET1E-205ENST00000529948 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
RAET1E-205ENST00000529948 FANCD2Q9BXW9 1451 aa15.94■□□□□ 0.14
RAET1E-205ENST00000529948 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
RAET1E-205ENST00000529948 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
RAET1E-205ENST00000529948 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
RAET1E-205ENST00000529948 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
RAET1E-205ENST00000529948 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
RAET1E-205ENST00000529948 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
RAET1E-205ENST00000529948 WDR62O43379 1518 aa15.76■□□□□ 0.11
RAET1E-205ENST00000529948 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
RAET1E-205ENST00000529948 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
RAET1E-205ENST00000529948 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
RAET1E-205ENST00000529948 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
RAET1E-205ENST00000529948 CUX1P39880 1505 aa15.63■□□□□ 0.09
RAET1E-205ENST00000529948 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
RAET1E-205ENST00000529948 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
RAET1E-205ENST00000529948 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
RAET1E-205ENST00000529948 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
RAET1E-205ENST00000529948 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
RAET1E-205ENST00000529948 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
RAET1E-205ENST00000529948 SOGA1O94964 1423 aa15.53■□□□□ 0.08
RAET1E-205ENST00000529948 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
RAET1E-205ENST00000529948 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
RAET1E-205ENST00000529948 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
RAET1E-205ENST00000529948 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
RAET1E-205ENST00000529948 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
RAET1E-205ENST00000529948 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
RAET1E-205ENST00000529948 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
RAET1E-205ENST00000529948 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
RAET1E-205ENST00000529948 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
RAET1E-205ENST00000529948 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
RAET1E-205ENST00000529948 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAET1E-205ENST00000529948 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
RAET1E-205ENST00000529948 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
RAET1E-205ENST00000529948 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
RAET1E-205ENST00000529948 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
RAET1E-205ENST00000529948 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
RAET1E-205ENST00000529948 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
RAET1E-205ENST00000529948 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
RAET1E-205ENST00000529948 EEA1Q15075 1411 aa15.26■□□□□ 0.03
RAET1E-205ENST00000529948 CUL7Q14999 1698 aa15.24■□□□□ 0.03
RAET1E-205ENST00000529948 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
RAET1E-205ENST00000529948 FBLN2P98095 1184 aa15.22■□□□□ 0.03
RAET1E-205ENST00000529948 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
RAET1E-205ENST00000529948 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
RAET1E-205ENST00000529948 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
RAET1E-205ENST00000529948 CHD1O14646 1710 aa15.18■□□□□ 0.02
RAET1E-205ENST00000529948 IGF1RP08069 1367 aa15.17■□□□□ 0.02
RAET1E-205ENST00000529948 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
RAET1E-205ENST00000529948 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
RAET1E-205ENST00000529948 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
RAET1E-205ENST00000529948 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
RAET1E-205ENST00000529948 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
RAET1E-205ENST00000529948 PRXQ9BXM0 1461 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms