RNA–Protein interactions for RNA: ENST00000529921.1

LRP4-204, Transcript of LDL receptor related protein 4, humanhuman

TSL 4

Gene LRP4, Length 590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-204ENST00000529921 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
LRP4-204ENST00000529921 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
LRP4-204ENST00000529921 ABCC9O60706 1549 aa25.05■■□□□ 1.6
LRP4-204ENST00000529921 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
LRP4-204ENST00000529921 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
LRP4-204ENST00000529921 NACADO15069 1562 aa23.91■■□□□ 1.42
LRP4-204ENST00000529921 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
LRP4-204ENST00000529921 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
LRP4-204ENST00000529921 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
LRP4-204ENST00000529921 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
LRP4-204ENST00000529921 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
LRP4-204ENST00000529921 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
LRP4-204ENST00000529921 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
LRP4-204ENST00000529921 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
LRP4-204ENST00000529921 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
LRP4-204ENST00000529921 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
LRP4-204ENST00000529921 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
LRP4-204ENST00000529921 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
LRP4-204ENST00000529921 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
LRP4-204ENST00000529921 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
LRP4-204ENST00000529921 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
LRP4-204ENST00000529921 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
LRP4-204ENST00000529921 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
LRP4-204ENST00000529921 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
LRP4-204ENST00000529921 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
LRP4-204ENST00000529921 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
LRP4-204ENST00000529921 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
LRP4-204ENST00000529921 WIZO95785 1651 aa21.81■■□□□ 1.08
LRP4-204ENST00000529921 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
LRP4-204ENST00000529921 NESP48681 1621 aa21.62■■□□□ 1.05
LRP4-204ENST00000529921 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
LRP4-204ENST00000529921 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
LRP4-204ENST00000529921 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
LRP4-204ENST00000529921 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
LRP4-204ENST00000529921 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
LRP4-204ENST00000529921 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
LRP4-204ENST00000529921 CUX2O14529 1486 aa21.34■■□□□ 1.01
LRP4-204ENST00000529921 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
LRP4-204ENST00000529921 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
LRP4-204ENST00000529921 CFTRP13569 1480 aa21.25■□□□□ 0.99
LRP4-204ENST00000529921 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
LRP4-204ENST00000529921 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
LRP4-204ENST00000529921 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
LRP4-204ENST00000529921 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
LRP4-204ENST00000529921 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
LRP4-204ENST00000529921 WDR62O43379 1518 aa21.09■□□□□ 0.97
LRP4-204ENST00000529921 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
LRP4-204ENST00000529921 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
LRP4-204ENST00000529921 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
LRP4-204ENST00000529921 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
LRP4-204ENST00000529921 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
LRP4-204ENST00000529921 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
LRP4-204ENST00000529921 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
LRP4-204ENST00000529921 CUX1P39880 1505 aa20.65■□□□□ 0.9
LRP4-204ENST00000529921 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
LRP4-204ENST00000529921 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
LRP4-204ENST00000529921 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
LRP4-204ENST00000529921 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
LRP4-204ENST00000529921 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
LRP4-204ENST00000529921 SOGA1O94964 1423 aa20.59■□□□□ 0.89
LRP4-204ENST00000529921 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
LRP4-204ENST00000529921 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
LRP4-204ENST00000529921 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
LRP4-204ENST00000529921 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
LRP4-204ENST00000529921 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
LRP4-204ENST00000529921 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
LRP4-204ENST00000529921 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
LRP4-204ENST00000529921 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
LRP4-204ENST00000529921 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
LRP4-204ENST00000529921 FBLN2P98095 1184 aa20.42■□□□□ 0.86
LRP4-204ENST00000529921 CHD1O14646 1710 aa20.41■□□□□ 0.86
LRP4-204ENST00000529921 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
LRP4-204ENST00000529921 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
LRP4-204ENST00000529921 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
LRP4-204ENST00000529921 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
LRP4-204ENST00000529921 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
LRP4-204ENST00000529921 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
LRP4-204ENST00000529921 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
LRP4-204ENST00000529921 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
LRP4-204ENST00000529921 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
LRP4-204ENST00000529921 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
LRP4-204ENST00000529921 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
LRP4-204ENST00000529921 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
LRP4-204ENST00000529921 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
LRP4-204ENST00000529921 ADAMTS12P58397 1594 aa20.15■□□□□ 0.82
LRP4-204ENST00000529921 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
LRP4-204ENST00000529921 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
LRP4-204ENST00000529921 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
LRP4-204ENST00000529921 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
LRP4-204ENST00000529921 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
LRP4-204ENST00000529921 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
LRP4-204ENST00000529921 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
LRP4-204ENST00000529921 CEP170Q5SW79 1584 aa20■□□□□ 0.79
LRP4-204ENST00000529921 CUL7Q14999 1698 aa19.97■□□□□ 0.79
LRP4-204ENST00000529921 NUP160Q12769 1436 aa19.96■□□□□ 0.79
LRP4-204ENST00000529921 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
LRP4-204ENST00000529921 IGF1RP08069 1367 aa19.95■□□□□ 0.79
LRP4-204ENST00000529921 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
LRP4-204ENST00000529921 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
LRP4-204ENST00000529921 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms