RNA–Protein interactions for RNA: ENST00000529871.1

CASP1-211, Transcript of caspase 1, humanhuman

TSL 1 (best)

Gene CASP1, Length 1,392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-211ENST00000529871 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
CASP1-211ENST00000529871 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
CASP1-211ENST00000529871 ABCC9O60706 1549 aa18.14■□□□□ 0.49
CASP1-211ENST00000529871 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
CASP1-211ENST00000529871 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
CASP1-211ENST00000529871 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
CASP1-211ENST00000529871 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
CASP1-211ENST00000529871 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
CASP1-211ENST00000529871 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
CASP1-211ENST00000529871 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
CASP1-211ENST00000529871 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
CASP1-211ENST00000529871 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
CASP1-211ENST00000529871 NACADO15069 1562 aa16.85■□□□□ 0.29
CASP1-211ENST00000529871 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
CASP1-211ENST00000529871 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
CASP1-211ENST00000529871 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
CASP1-211ENST00000529871 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CASP1-211ENST00000529871 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
CASP1-211ENST00000529871 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
CASP1-211ENST00000529871 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
CASP1-211ENST00000529871 CUX2O14529 1486 aa16.16■□□□□ 0.18
CASP1-211ENST00000529871 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
CASP1-211ENST00000529871 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
CASP1-211ENST00000529871 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
CASP1-211ENST00000529871 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
CASP1-211ENST00000529871 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
CASP1-211ENST00000529871 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.1
CASP1-211ENST00000529871 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
CASP1-211ENST00000529871 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
CASP1-211ENST00000529871 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
CASP1-211ENST00000529871 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
CASP1-211ENST00000529871 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
CASP1-211ENST00000529871 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
CASP1-211ENST00000529871 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
CASP1-211ENST00000529871 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
CASP1-211ENST00000529871 WIZO95785 1651 aa15.5■□□□□ 0.07
CASP1-211ENST00000529871 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
CASP1-211ENST00000529871 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
CASP1-211ENST00000529871 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
CASP1-211ENST00000529871 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
CASP1-211ENST00000529871 NESP48681 1621 aa15.33■□□□□ 0.04
CASP1-211ENST00000529871 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
CASP1-211ENST00000529871 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
CASP1-211ENST00000529871 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
CASP1-211ENST00000529871 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
CASP1-211ENST00000529871 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
CASP1-211ENST00000529871 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
CASP1-211ENST00000529871 LAMC3Q9Y6N6 1575 aa15.12■□□□□ 0.01
CASP1-211ENST00000529871 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
CASP1-211ENST00000529871 CFTRP13569 1480 aa15.09■□□□□ 0.01
CASP1-211ENST00000529871 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
CASP1-211ENST00000529871 WDR62O43379 1518 aa15.02■□□□□ -0
CASP1-211ENST00000529871 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
CASP1-211ENST00000529871 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
CASP1-211ENST00000529871 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
CASP1-211ENST00000529871 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
CASP1-211ENST00000529871 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
CASP1-211ENST00000529871 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
CASP1-211ENST00000529871 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
CASP1-211ENST00000529871 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
CASP1-211ENST00000529871 FOXD1Q16676 465 aa14.84□□□□□ -0.03
CASP1-211ENST00000529871 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
CASP1-211ENST00000529871 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
CASP1-211ENST00000529871 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.04
CASP1-211ENST00000529871 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
CASP1-211ENST00000529871 DNMBPQ6XZF7 1577 aa14.71□□□□□ -0.05
CASP1-211ENST00000529871 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
CASP1-211ENST00000529871 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
CASP1-211ENST00000529871 CUX1P39880 1505 aa14.69□□□□□ -0.06
CASP1-211ENST00000529871 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
CASP1-211ENST00000529871 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
CASP1-211ENST00000529871 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
CASP1-211ENST00000529871 SOGA1O94964 1423 aa14.64□□□□□ -0.07
CASP1-211ENST00000529871 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
CASP1-211ENST00000529871 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
CASP1-211ENST00000529871 IFT140Q96RY7 1462 aa14.58□□□□□ -0.08
CASP1-211ENST00000529871 EEA1Q15075 1411 aa14.58□□□□□ -0.08
CASP1-211ENST00000529871 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
CASP1-211ENST00000529871 ABCA10Q8WWZ4 1543 aa14.52□□□□□ -0.08
CASP1-211ENST00000529871 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.09
CASP1-211ENST00000529871 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
CASP1-211ENST00000529871 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
CASP1-211ENST00000529871 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
CASP1-211ENST00000529871 CHD1O14646 1710 aa14.47□□□□□ -0.09
CASP1-211ENST00000529871 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
CASP1-211ENST00000529871 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
CASP1-211ENST00000529871 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
CASP1-211ENST00000529871 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
CASP1-211ENST00000529871 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
CASP1-211ENST00000529871 IGF1RP08069 1367 aa14.4□□□□□ -0.1
CASP1-211ENST00000529871 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.1
CASP1-211ENST00000529871 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
CASP1-211ENST00000529871 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
CASP1-211ENST00000529871 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
CASP1-211ENST00000529871 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
CASP1-211ENST00000529871 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
CASP1-211ENST00000529871 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
CASP1-211ENST00000529871 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
CASP1-211ENST00000529871 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
CASP1-211ENST00000529871 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms