RNA–Protein interactions for RNA: ENST00000529827.1

AP003063.1-203, humanhuman

TSL 2 BASIC

Gene AP003063.1, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-203ENST00000529827 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
AP003063.1-203ENST00000529827 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
AP003063.1-203ENST00000529827 ABCC9O60706 1549 aa22.99■■□□□ 1.27
AP003063.1-203ENST00000529827 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
AP003063.1-203ENST00000529827 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
AP003063.1-203ENST00000529827 NACADO15069 1562 aa22.12■■□□□ 1.13
AP003063.1-203ENST00000529827 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.13
AP003063.1-203ENST00000529827 MYO15BQ96JP2 1530 aa22.04■■□□□ 1.12
AP003063.1-203ENST00000529827 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
AP003063.1-203ENST00000529827 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
AP003063.1-203ENST00000529827 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
AP003063.1-203ENST00000529827 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
AP003063.1-203ENST00000529827 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
AP003063.1-203ENST00000529827 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
AP003063.1-203ENST00000529827 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
AP003063.1-203ENST00000529827 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
AP003063.1-203ENST00000529827 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
AP003063.1-203ENST00000529827 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
AP003063.1-203ENST00000529827 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
AP003063.1-203ENST00000529827 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
AP003063.1-203ENST00000529827 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
AP003063.1-203ENST00000529827 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
AP003063.1-203ENST00000529827 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
AP003063.1-203ENST00000529827 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
AP003063.1-203ENST00000529827 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
AP003063.1-203ENST00000529827 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
AP003063.1-203ENST00000529827 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
AP003063.1-203ENST00000529827 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
AP003063.1-203ENST00000529827 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
AP003063.1-203ENST00000529827 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
AP003063.1-203ENST00000529827 WIZO95785 1651 aa20.26■□□□□ 0.83
AP003063.1-203ENST00000529827 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
AP003063.1-203ENST00000529827 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
AP003063.1-203ENST00000529827 NESP48681 1621 aa19.94■□□□□ 0.78
AP003063.1-203ENST00000529827 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
AP003063.1-203ENST00000529827 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
AP003063.1-203ENST00000529827 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
AP003063.1-203ENST00000529827 CFTRP13569 1480 aa19.79■□□□□ 0.76
AP003063.1-203ENST00000529827 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
AP003063.1-203ENST00000529827 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
AP003063.1-203ENST00000529827 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
AP003063.1-203ENST00000529827 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
AP003063.1-203ENST00000529827 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
AP003063.1-203ENST00000529827 CUX2O14529 1486 aa19.51■□□□□ 0.71
AP003063.1-203ENST00000529827 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
AP003063.1-203ENST00000529827 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
AP003063.1-203ENST00000529827 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
AP003063.1-203ENST00000529827 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
AP003063.1-203ENST00000529827 WDR62O43379 1518 aa19.42■□□□□ 0.7
AP003063.1-203ENST00000529827 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
AP003063.1-203ENST00000529827 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
AP003063.1-203ENST00000529827 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
AP003063.1-203ENST00000529827 CUX1P39880 1505 aa19.23■□□□□ 0.67
AP003063.1-203ENST00000529827 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
AP003063.1-203ENST00000529827 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
AP003063.1-203ENST00000529827 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
AP003063.1-203ENST00000529827 SOGA1O94964 1423 aa19.15■□□□□ 0.66
AP003063.1-203ENST00000529827 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
AP003063.1-203ENST00000529827 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
AP003063.1-203ENST00000529827 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
AP003063.1-203ENST00000529827 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
AP003063.1-203ENST00000529827 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
AP003063.1-203ENST00000529827 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
AP003063.1-203ENST00000529827 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
AP003063.1-203ENST00000529827 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
AP003063.1-203ENST00000529827 BIVM-ERCC5R4GMW8 1640 aa19■□□□□ 0.63
AP003063.1-203ENST00000529827 ABCA10Q8WWZ4 1543 aa18.96■□□□□ 0.63
AP003063.1-203ENST00000529827 DNAJC5Q9H3Z4 198 aa18.92■□□□□ 0.62
AP003063.1-203ENST00000529827 EIF4G3O43432 1585 aaKnown RBP18.92■□□□□ 0.62
AP003063.1-203ENST00000529827 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
AP003063.1-203ENST00000529827 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
AP003063.1-203ENST00000529827 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
AP003063.1-203ENST00000529827 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
AP003063.1-203ENST00000529827 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
AP003063.1-203ENST00000529827 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
AP003063.1-203ENST00000529827 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
AP003063.1-203ENST00000529827 FBLN2P98095 1184 aa18.8■□□□□ 0.6
AP003063.1-203ENST00000529827 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
AP003063.1-203ENST00000529827 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
AP003063.1-203ENST00000529827 IGF1RP08069 1367 aa18.76■□□□□ 0.59
AP003063.1-203ENST00000529827 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
AP003063.1-203ENST00000529827 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
AP003063.1-203ENST00000529827 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
AP003063.1-203ENST00000529827 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
AP003063.1-203ENST00000529827 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
AP003063.1-203ENST00000529827 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
AP003063.1-203ENST00000529827 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
AP003063.1-203ENST00000529827 CHD1O14646 1710 aa18.64■□□□□ 0.57
AP003063.1-203ENST00000529827 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
AP003063.1-203ENST00000529827 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
AP003063.1-203ENST00000529827 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
AP003063.1-203ENST00000529827 NUP160Q12769 1436 aa18.55■□□□□ 0.56
AP003063.1-203ENST00000529827 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
AP003063.1-203ENST00000529827 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
AP003063.1-203ENST00000529827 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
AP003063.1-203ENST00000529827 CUL7Q14999 1698 aa18.49■□□□□ 0.55
AP003063.1-203ENST00000529827 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
AP003063.1-203ENST00000529827 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
AP003063.1-203ENST00000529827 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
AP003063.1-203ENST00000529827 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms