RNA–Protein interactions for RNA: ENST00000529448.5

MRVI1-206, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 2

Gene MRVI1, Length 2,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-206ENST00000529448 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
MRVI1-206ENST00000529448 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
MRVI1-206ENST00000529448 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
MRVI1-206ENST00000529448 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
MRVI1-206ENST00000529448 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
MRVI1-206ENST00000529448 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
MRVI1-206ENST00000529448 ABCC9O60706 1549 aa28.13■■■□□ 2.09
MRVI1-206ENST00000529448 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
MRVI1-206ENST00000529448 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.03
MRVI1-206ENST00000529448 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
MRVI1-206ENST00000529448 NACADO15069 1562 aa27.64■■■□□ 2.02
MRVI1-206ENST00000529448 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
MRVI1-206ENST00000529448 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
MRVI1-206ENST00000529448 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
MRVI1-206ENST00000529448 CECR2Q9BXF3 1484 aa26.91■■□□□ 1.9
MRVI1-206ENST00000529448 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
MRVI1-206ENST00000529448 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
MRVI1-206ENST00000529448 BICRAQ9NZM4 1560 aa26.66■■□□□ 1.86
MRVI1-206ENST00000529448 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
MRVI1-206ENST00000529448 WIZO95785 1651 aa26.53■■□□□ 1.84
MRVI1-206ENST00000529448 BAZ1AQ9NRL2 1556 aaPredicted RBP26.52■■□□□ 1.84
MRVI1-206ENST00000529448 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
MRVI1-206ENST00000529448 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
MRVI1-206ENST00000529448 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
MRVI1-206ENST00000529448 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
MRVI1-206ENST00000529448 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
MRVI1-206ENST00000529448 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
MRVI1-206ENST00000529448 TRIM41Q8WV44 630 aa25.89■■□□□ 1.73
MRVI1-206ENST00000529448 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
MRVI1-206ENST00000529448 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
MRVI1-206ENST00000529448 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
MRVI1-206ENST00000529448 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
MRVI1-206ENST00000529448 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
MRVI1-206ENST00000529448 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
MRVI1-206ENST00000529448 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
MRVI1-206ENST00000529448 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
MRVI1-206ENST00000529448 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
MRVI1-206ENST00000529448 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
MRVI1-206ENST00000529448 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
MRVI1-206ENST00000529448 SOGA1O94964 1423 aa25.23■■□□□ 1.63
MRVI1-206ENST00000529448 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
MRVI1-206ENST00000529448 CFTRP13569 1480 aa25.14■■□□□ 1.61
MRVI1-206ENST00000529448 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
MRVI1-206ENST00000529448 TOP2BQ02880 1626 aa25■■□□□ 1.59
MRVI1-206ENST00000529448 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
MRVI1-206ENST00000529448 EEA1Q15075 1411 aa24.96■■□□□ 1.59
MRVI1-206ENST00000529448 CUX1P39880 1505 aa24.95■■□□□ 1.58
MRVI1-206ENST00000529448 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
MRVI1-206ENST00000529448 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
MRVI1-206ENST00000529448 PRDM2Q13029 1718 aa24.89■■□□□ 1.58
MRVI1-206ENST00000529448 PCGF6Q9BYE7 350 aa24.87■■□□□ 1.57
MRVI1-206ENST00000529448 NESP48681 1621 aa24.84■■□□□ 1.57
MRVI1-206ENST00000529448 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
MRVI1-206ENST00000529448 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
MRVI1-206ENST00000529448 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
MRVI1-206ENST00000529448 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
MRVI1-206ENST00000529448 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
MRVI1-206ENST00000529448 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
MRVI1-206ENST00000529448 KIF21BO75037 1637 aa24.68■■□□□ 1.54
MRVI1-206ENST00000529448 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
MRVI1-206ENST00000529448 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
MRVI1-206ENST00000529448 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
MRVI1-206ENST00000529448 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
MRVI1-206ENST00000529448 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
MRVI1-206ENST00000529448 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
MRVI1-206ENST00000529448 CUX2O14529 1486 aa24.53■■□□□ 1.52
MRVI1-206ENST00000529448 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
MRVI1-206ENST00000529448 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
MRVI1-206ENST00000529448 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
MRVI1-206ENST00000529448 RANGAP1P46060 587 aaPredicted RBP24.46■■□□□ 1.51
MRVI1-206ENST00000529448 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
MRVI1-206ENST00000529448 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
MRVI1-206ENST00000529448 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.5
MRVI1-206ENST00000529448 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
MRVI1-206ENST00000529448 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
MRVI1-206ENST00000529448 CLIP1P30622 1438 aa24.42■■□□□ 1.5
MRVI1-206ENST00000529448 IGF1RP08069 1367 aa24.42■■□□□ 1.5
MRVI1-206ENST00000529448 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
MRVI1-206ENST00000529448 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
MRVI1-206ENST00000529448 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.48
MRVI1-206ENST00000529448 HRCP23327 699 aa24.32■■□□□ 1.48
MRVI1-206ENST00000529448 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
MRVI1-206ENST00000529448 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
MRVI1-206ENST00000529448 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
MRVI1-206ENST00000529448 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
MRVI1-206ENST00000529448 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
MRVI1-206ENST00000529448 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
MRVI1-206ENST00000529448 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
MRVI1-206ENST00000529448 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
MRVI1-206ENST00000529448 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
MRVI1-206ENST00000529448 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
MRVI1-206ENST00000529448 CUL7Q14999 1698 aa24.03■■□□□ 1.44
MRVI1-206ENST00000529448 APLP2Q06481 763 aa24■■□□□ 1.43
MRVI1-206ENST00000529448 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
MRVI1-206ENST00000529448 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.43
MRVI1-206ENST00000529448 WDR62O43379 1518 aa23.98■■□□□ 1.43
MRVI1-206ENST00000529448 P3H3Q8IVL6 736 aa23.92■■□□□ 1.42
MRVI1-206ENST00000529448 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
MRVI1-206ENST00000529448 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
MRVI1-206ENST00000529448 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms