RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
CLP1-203ENST00000529430 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
CLP1-203ENST00000529430 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
CLP1-203ENST00000529430 ABCC9O60706 1549 aa21.45■■□□□ 1.02
CLP1-203ENST00000529430 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
CLP1-203ENST00000529430 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
CLP1-203ENST00000529430 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
CLP1-203ENST00000529430 NACADO15069 1562 aa21.07■□□□□ 0.96
CLP1-203ENST00000529430 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
CLP1-203ENST00000529430 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
CLP1-203ENST00000529430 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
CLP1-203ENST00000529430 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
CLP1-203ENST00000529430 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.84
CLP1-203ENST00000529430 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLP1-203ENST00000529430 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
CLP1-203ENST00000529430 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
CLP1-203ENST00000529430 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
CLP1-203ENST00000529430 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
CLP1-203ENST00000529430 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
CLP1-203ENST00000529430 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
CLP1-203ENST00000529430 SMARCA4P51532 1647 aa19.83■□□□□ 0.77
CLP1-203ENST00000529430 WIZO95785 1651 aa19.69■□□□□ 0.74
CLP1-203ENST00000529430 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
CLP1-203ENST00000529430 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
CLP1-203ENST00000529430 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
CLP1-203ENST00000529430 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
CLP1-203ENST00000529430 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
CLP1-203ENST00000529430 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
CLP1-203ENST00000529430 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
CLP1-203ENST00000529430 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
CLP1-203ENST00000529430 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
CLP1-203ENST00000529430 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
CLP1-203ENST00000529430 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
CLP1-203ENST00000529430 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
CLP1-203ENST00000529430 HRCP23327 699 aa18.97■□□□□ 0.63
CLP1-203ENST00000529430 CFTRP13569 1480 aa18.97■□□□□ 0.63
CLP1-203ENST00000529430 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
CLP1-203ENST00000529430 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
CLP1-203ENST00000529430 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
CLP1-203ENST00000529430 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
CLP1-203ENST00000529430 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
CLP1-203ENST00000529430 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
CLP1-203ENST00000529430 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
CLP1-203ENST00000529430 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
CLP1-203ENST00000529430 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
CLP1-203ENST00000529430 NESP48681 1621 aa18.74■□□□□ 0.59
CLP1-203ENST00000529430 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
CLP1-203ENST00000529430 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
CLP1-203ENST00000529430 EEA1Q15075 1411 aa18.68■□□□□ 0.58
CLP1-203ENST00000529430 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
CLP1-203ENST00000529430 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
CLP1-203ENST00000529430 TOP2BQ02880 1626 aa18.64■□□□□ 0.58
CLP1-203ENST00000529430 CUX1P39880 1505 aa18.6■□□□□ 0.57
CLP1-203ENST00000529430 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
CLP1-203ENST00000529430 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
CLP1-203ENST00000529430 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
CLP1-203ENST00000529430 SOGA1O94964 1423 aa18.53■□□□□ 0.56
CLP1-203ENST00000529430 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
CLP1-203ENST00000529430 KIF21AQ7Z4S6 1674 aa18.49■□□□□ 0.55
CLP1-203ENST00000529430 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
CLP1-203ENST00000529430 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
CLP1-203ENST00000529430 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
CLP1-203ENST00000529430 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
CLP1-203ENST00000529430 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
CLP1-203ENST00000529430 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
CLP1-203ENST00000529430 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
CLP1-203ENST00000529430 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
CLP1-203ENST00000529430 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
CLP1-203ENST00000529430 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
CLP1-203ENST00000529430 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
CLP1-203ENST00000529430 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
CLP1-203ENST00000529430 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
CLP1-203ENST00000529430 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
CLP1-203ENST00000529430 CUX2O14529 1486 aa18.34■□□□□ 0.53
CLP1-203ENST00000529430 WDR62O43379 1518 aa18.32■□□□□ 0.52
CLP1-203ENST00000529430 KIF21BO75037 1637 aa18.31■□□□□ 0.52
CLP1-203ENST00000529430 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
CLP1-203ENST00000529430 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
CLP1-203ENST00000529430 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
CLP1-203ENST00000529430 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
CLP1-203ENST00000529430 IGF1RP08069 1367 aa18.2■□□□□ 0.5
CLP1-203ENST00000529430 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
CLP1-203ENST00000529430 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
CLP1-203ENST00000529430 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
CLP1-203ENST00000529430 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
CLP1-203ENST00000529430 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
CLP1-203ENST00000529430 ERICH3Q5RHP9 1530 aa18.15■□□□□ 0.5
CLP1-203ENST00000529430 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
CLP1-203ENST00000529430 CLIP1P30622 1438 aa18.14■□□□□ 0.49
CLP1-203ENST00000529430 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
CLP1-203ENST00000529430 ABCA5Q8WWZ7 1642 aa18.11■□□□□ 0.49
CLP1-203ENST00000529430 CUL7Q14999 1698 aa18.07■□□□□ 0.48
CLP1-203ENST00000529430 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLP1-203ENST00000529430 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
CLP1-203ENST00000529430 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
CLP1-203ENST00000529430 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
CLP1-203ENST00000529430 APLP2Q06481 763 aa17.99■□□□□ 0.47
CLP1-203ENST00000529430 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
CLP1-203ENST00000529430 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
CLP1-203ENST00000529430 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms