RNA–Protein interactions for RNA: ENST00000529268.1

PDGFD-203, Transcript of platelet derived growth factor D, humanhuman

TSL 5

Gene PDGFD, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-203ENST00000529268 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
PDGFD-203ENST00000529268 ABCC9O60706 1549 aa22.86■■□□□ 1.25
PDGFD-203ENST00000529268 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
PDGFD-203ENST00000529268 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
PDGFD-203ENST00000529268 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
PDGFD-203ENST00000529268 NACADO15069 1562 aa21.57■■□□□ 1.04
PDGFD-203ENST00000529268 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
PDGFD-203ENST00000529268 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDGFD-203ENST00000529268 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
PDGFD-203ENST00000529268 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
PDGFD-203ENST00000529268 BICRAQ9NZM4 1560 aa21.07■□□□□ 0.96
PDGFD-203ENST00000529268 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
PDGFD-203ENST00000529268 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
PDGFD-203ENST00000529268 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
PDGFD-203ENST00000529268 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
PDGFD-203ENST00000529268 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
PDGFD-203ENST00000529268 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
PDGFD-203ENST00000529268 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
PDGFD-203ENST00000529268 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
PDGFD-203ENST00000529268 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
PDGFD-203ENST00000529268 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
PDGFD-203ENST00000529268 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
PDGFD-203ENST00000529268 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
PDGFD-203ENST00000529268 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
PDGFD-203ENST00000529268 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
PDGFD-203ENST00000529268 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
PDGFD-203ENST00000529268 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
PDGFD-203ENST00000529268 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
PDGFD-203ENST00000529268 NESP48681 1621 aa19.66■□□□□ 0.74
PDGFD-203ENST00000529268 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
PDGFD-203ENST00000529268 CUX2O14529 1486 aa19.6■□□□□ 0.73
PDGFD-203ENST00000529268 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
PDGFD-203ENST00000529268 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
PDGFD-203ENST00000529268 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
PDGFD-203ENST00000529268 WIZO95785 1651 aa19.41■□□□□ 0.7
PDGFD-203ENST00000529268 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
PDGFD-203ENST00000529268 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
PDGFD-203ENST00000529268 KIF21AQ7Z4S6 1674 aa19.23■□□□□ 0.67
PDGFD-203ENST00000529268 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
PDGFD-203ENST00000529268 CFTRP13569 1480 aa19.19■□□□□ 0.66
PDGFD-203ENST00000529268 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
PDGFD-203ENST00000529268 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
PDGFD-203ENST00000529268 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
PDGFD-203ENST00000529268 WDR62O43379 1518 aa19.1■□□□□ 0.65
PDGFD-203ENST00000529268 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
PDGFD-203ENST00000529268 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
PDGFD-203ENST00000529268 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
PDGFD-203ENST00000529268 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
PDGFD-203ENST00000529268 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
PDGFD-203ENST00000529268 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
PDGFD-203ENST00000529268 IFT140Q96RY7 1462 aa18.77■□□□□ 0.6
PDGFD-203ENST00000529268 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
PDGFD-203ENST00000529268 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
PDGFD-203ENST00000529268 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
PDGFD-203ENST00000529268 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
PDGFD-203ENST00000529268 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
PDGFD-203ENST00000529268 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDGFD-203ENST00000529268 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
PDGFD-203ENST00000529268 SOGA1O94964 1423 aa18.61■□□□□ 0.57
PDGFD-203ENST00000529268 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
PDGFD-203ENST00000529268 FBLN2P98095 1184 aa18.6■□□□□ 0.57
PDGFD-203ENST00000529268 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
PDGFD-203ENST00000529268 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
PDGFD-203ENST00000529268 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
PDGFD-203ENST00000529268 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
PDGFD-203ENST00000529268 CUX1P39880 1505 aa18.5■□□□□ 0.55
PDGFD-203ENST00000529268 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
PDGFD-203ENST00000529268 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
PDGFD-203ENST00000529268 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
PDGFD-203ENST00000529268 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
PDGFD-203ENST00000529268 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
PDGFD-203ENST00000529268 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
PDGFD-203ENST00000529268 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
PDGFD-203ENST00000529268 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
PDGFD-203ENST00000529268 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
PDGFD-203ENST00000529268 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
PDGFD-203ENST00000529268 CHD1O14646 1710 aa18.32■□□□□ 0.52
PDGFD-203ENST00000529268 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
PDGFD-203ENST00000529268 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
PDGFD-203ENST00000529268 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
PDGFD-203ENST00000529268 SYNJ2O15056 1496 aa18.28■□□□□ 0.52
PDGFD-203ENST00000529268 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
PDGFD-203ENST00000529268 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
PDGFD-203ENST00000529268 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
PDGFD-203ENST00000529268 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
PDGFD-203ENST00000529268 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
PDGFD-203ENST00000529268 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
PDGFD-203ENST00000529268 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
PDGFD-203ENST00000529268 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
PDGFD-203ENST00000529268 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
PDGFD-203ENST00000529268 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
PDGFD-203ENST00000529268 NUP160Q12769 1436 aa18.06■□□□□ 0.48
PDGFD-203ENST00000529268 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
PDGFD-203ENST00000529268 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
PDGFD-203ENST00000529268 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
PDGFD-203ENST00000529268 CEP170Q5SW79 1584 aa18■□□□□ 0.47
PDGFD-203ENST00000529268 IGF1RP08069 1367 aa17.99■□□□□ 0.47
PDGFD-203ENST00000529268 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
PDGFD-203ENST00000529268 PRG4Q92954 1404 aaPredicted RBP17.94■□□□□ 0.46
PDGFD-203ENST00000529268 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms