RNA–Protein interactions for RNA: ENST00000529238.5

AP003063.1-202, humanhuman

TSL 3 BASIC

Gene AP003063.1, Length 520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-202ENST00000529238 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
AP003063.1-202ENST00000529238 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
AP003063.1-202ENST00000529238 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
AP003063.1-202ENST00000529238 ABCC9O60706 1549 aa23.49■■□□□ 1.35
AP003063.1-202ENST00000529238 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
AP003063.1-202ENST00000529238 MYO15BQ96JP2 1530 aa23.24■■□□□ 1.31
AP003063.1-202ENST00000529238 NACADO15069 1562 aa23.06■■□□□ 1.28
AP003063.1-202ENST00000529238 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
AP003063.1-202ENST00000529238 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
AP003063.1-202ENST00000529238 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
AP003063.1-202ENST00000529238 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
AP003063.1-202ENST00000529238 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
AP003063.1-202ENST00000529238 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
AP003063.1-202ENST00000529238 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
AP003063.1-202ENST00000529238 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
AP003063.1-202ENST00000529238 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
AP003063.1-202ENST00000529238 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
AP003063.1-202ENST00000529238 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
AP003063.1-202ENST00000529238 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
AP003063.1-202ENST00000529238 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
AP003063.1-202ENST00000529238 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
AP003063.1-202ENST00000529238 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
AP003063.1-202ENST00000529238 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
AP003063.1-202ENST00000529238 WIZO95785 1651 aa21.39■■□□□ 1.01
AP003063.1-202ENST00000529238 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
AP003063.1-202ENST00000529238 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
AP003063.1-202ENST00000529238 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
AP003063.1-202ENST00000529238 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
AP003063.1-202ENST00000529238 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
AP003063.1-202ENST00000529238 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
AP003063.1-202ENST00000529238 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
AP003063.1-202ENST00000529238 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
AP003063.1-202ENST00000529238 CFTRP13569 1480 aa20.75■□□□□ 0.91
AP003063.1-202ENST00000529238 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
AP003063.1-202ENST00000529238 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
AP003063.1-202ENST00000529238 NESP48681 1621 aa20.54■□□□□ 0.88
AP003063.1-202ENST00000529238 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
AP003063.1-202ENST00000529238 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
AP003063.1-202ENST00000529238 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
AP003063.1-202ENST00000529238 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
AP003063.1-202ENST00000529238 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
AP003063.1-202ENST00000529238 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
AP003063.1-202ENST00000529238 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
AP003063.1-202ENST00000529238 CUX1P39880 1505 aa20.27■□□□□ 0.84
AP003063.1-202ENST00000529238 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
AP003063.1-202ENST00000529238 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
AP003063.1-202ENST00000529238 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
AP003063.1-202ENST00000529238 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
AP003063.1-202ENST00000529238 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
AP003063.1-202ENST00000529238 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AP003063.1-202ENST00000529238 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
AP003063.1-202ENST00000529238 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
AP003063.1-202ENST00000529238 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
AP003063.1-202ENST00000529238 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
AP003063.1-202ENST00000529238 WDR62O43379 1518 aa20.12■□□□□ 0.81
AP003063.1-202ENST00000529238 THOC2Q8NI27 1593 aaKnown RBP20.1■□□□□ 0.81
AP003063.1-202ENST00000529238 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
AP003063.1-202ENST00000529238 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
AP003063.1-202ENST00000529238 CUX2O14529 1486 aa19.99■□□□□ 0.79
AP003063.1-202ENST00000529238 SOGA1O94964 1423 aa19.98■□□□□ 0.79
AP003063.1-202ENST00000529238 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
AP003063.1-202ENST00000529238 EEA1Q15075 1411 aa19.95■□□□□ 0.78
AP003063.1-202ENST00000529238 RAD54L2Q9Y4B4 1467 aa19.95■□□□□ 0.78
AP003063.1-202ENST00000529238 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
AP003063.1-202ENST00000529238 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
AP003063.1-202ENST00000529238 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
AP003063.1-202ENST00000529238 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
AP003063.1-202ENST00000529238 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
AP003063.1-202ENST00000529238 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
AP003063.1-202ENST00000529238 IGF1RP08069 1367 aa19.81■□□□□ 0.76
AP003063.1-202ENST00000529238 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
AP003063.1-202ENST00000529238 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
AP003063.1-202ENST00000529238 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
AP003063.1-202ENST00000529238 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
AP003063.1-202ENST00000529238 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
AP003063.1-202ENST00000529238 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
AP003063.1-202ENST00000529238 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
AP003063.1-202ENST00000529238 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
AP003063.1-202ENST00000529238 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
AP003063.1-202ENST00000529238 KIF21BO75037 1637 aa19.65■□□□□ 0.74
AP003063.1-202ENST00000529238 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
AP003063.1-202ENST00000529238 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
AP003063.1-202ENST00000529238 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
AP003063.1-202ENST00000529238 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
AP003063.1-202ENST00000529238 CUL7Q14999 1698 aa19.59■□□□□ 0.73
AP003063.1-202ENST00000529238 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
AP003063.1-202ENST00000529238 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
AP003063.1-202ENST00000529238 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
AP003063.1-202ENST00000529238 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
AP003063.1-202ENST00000529238 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
AP003063.1-202ENST00000529238 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
AP003063.1-202ENST00000529238 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
AP003063.1-202ENST00000529238 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
AP003063.1-202ENST00000529238 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
AP003063.1-202ENST00000529238 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
AP003063.1-202ENST00000529238 NUP160Q12769 1436 aa19.37■□□□□ 0.69
AP003063.1-202ENST00000529238 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
AP003063.1-202ENST00000529238 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
AP003063.1-202ENST00000529238 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
AP003063.1-202ENST00000529238 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms