RNA–Protein interactions for RNA: ENST00000529203.1

PITPNM1-212, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 3

Gene PITPNM1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-212ENST00000529203 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
PITPNM1-212ENST00000529203 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
PITPNM1-212ENST00000529203 ABCC9O60706 1549 aa27.79■■■□□ 2.04
PITPNM1-212ENST00000529203 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
PITPNM1-212ENST00000529203 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
PITPNM1-212ENST00000529203 NACADO15069 1562 aa26.87■■□□□ 1.89
PITPNM1-212ENST00000529203 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
PITPNM1-212ENST00000529203 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
PITPNM1-212ENST00000529203 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
PITPNM1-212ENST00000529203 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
PITPNM1-212ENST00000529203 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
PITPNM1-212ENST00000529203 BICRAQ9NZM4 1560 aa25.99■■□□□ 1.75
PITPNM1-212ENST00000529203 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
PITPNM1-212ENST00000529203 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
PITPNM1-212ENST00000529203 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
PITPNM1-212ENST00000529203 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
PITPNM1-212ENST00000529203 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
PITPNM1-212ENST00000529203 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
PITPNM1-212ENST00000529203 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
PITPNM1-212ENST00000529203 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
PITPNM1-212ENST00000529203 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
PITPNM1-212ENST00000529203 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
PITPNM1-212ENST00000529203 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
PITPNM1-212ENST00000529203 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
PITPNM1-212ENST00000529203 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
PITPNM1-212ENST00000529203 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
PITPNM1-212ENST00000529203 WIZO95785 1651 aa24.67■■□□□ 1.54
PITPNM1-212ENST00000529203 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
PITPNM1-212ENST00000529203 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
PITPNM1-212ENST00000529203 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
PITPNM1-212ENST00000529203 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
PITPNM1-212ENST00000529203 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
PITPNM1-212ENST00000529203 NESP48681 1621 aa24.1■■□□□ 1.45
PITPNM1-212ENST00000529203 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
PITPNM1-212ENST00000529203 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
PITPNM1-212ENST00000529203 ERCC6Q03468 1493 aa23.96■■□□□ 1.43
PITPNM1-212ENST00000529203 CFTRP13569 1480 aa23.94■■□□□ 1.42
PITPNM1-212ENST00000529203 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
PITPNM1-212ENST00000529203 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PITPNM1-212ENST00000529203 KIF21AQ7Z4S6 1674 aa23.9■■□□□ 1.42
PITPNM1-212ENST00000529203 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
PITPNM1-212ENST00000529203 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
PITPNM1-212ENST00000529203 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
PITPNM1-212ENST00000529203 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
PITPNM1-212ENST00000529203 CUX2O14529 1486 aa23.61■■□□□ 1.37
PITPNM1-212ENST00000529203 WDR62O43379 1518 aa23.57■■□□□ 1.36
PITPNM1-212ENST00000529203 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
PITPNM1-212ENST00000529203 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
PITPNM1-212ENST00000529203 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
PITPNM1-212ENST00000529203 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PITPNM1-212ENST00000529203 CUX1P39880 1505 aa23.33■■□□□ 1.33
PITPNM1-212ENST00000529203 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
PITPNM1-212ENST00000529203 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
PITPNM1-212ENST00000529203 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
PITPNM1-212ENST00000529203 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
PITPNM1-212ENST00000529203 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
PITPNM1-212ENST00000529203 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
PITPNM1-212ENST00000529203 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
PITPNM1-212ENST00000529203 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
PITPNM1-212ENST00000529203 SOGA1O94964 1423 aa23.16■■□□□ 1.3
PITPNM1-212ENST00000529203 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
PITPNM1-212ENST00000529203 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
PITPNM1-212ENST00000529203 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
PITPNM1-212ENST00000529203 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
PITPNM1-212ENST00000529203 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
PITPNM1-212ENST00000529203 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
PITPNM1-212ENST00000529203 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
PITPNM1-212ENST00000529203 PBRM1Q86U86 1689 aa22.92■■□□□ 1.26
PITPNM1-212ENST00000529203 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
PITPNM1-212ENST00000529203 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
PITPNM1-212ENST00000529203 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
PITPNM1-212ENST00000529203 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
PITPNM1-212ENST00000529203 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
PITPNM1-212ENST00000529203 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
PITPNM1-212ENST00000529203 CHD1O14646 1710 aa22.78■■□□□ 1.24
PITPNM1-212ENST00000529203 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
PITPNM1-212ENST00000529203 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
PITPNM1-212ENST00000529203 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
PITPNM1-212ENST00000529203 FBLN2P98095 1184 aa22.72■■□□□ 1.23
PITPNM1-212ENST00000529203 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
PITPNM1-212ENST00000529203 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
PITPNM1-212ENST00000529203 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
PITPNM1-212ENST00000529203 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
PITPNM1-212ENST00000529203 CUL7Q14999 1698 aa22.64■■□□□ 1.21
PITPNM1-212ENST00000529203 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
PITPNM1-212ENST00000529203 IGF1RP08069 1367 aa22.62■■□□□ 1.21
PITPNM1-212ENST00000529203 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
PITPNM1-212ENST00000529203 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
PITPNM1-212ENST00000529203 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
PITPNM1-212ENST00000529203 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
PITPNM1-212ENST00000529203 EEA1Q15075 1411 aa22.49■■□□□ 1.19
PITPNM1-212ENST00000529203 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
PITPNM1-212ENST00000529203 CLASP1Q7Z460 1538 aa22.45■■□□□ 1.18
PITPNM1-212ENST00000529203 NUP160Q12769 1436 aa22.44■■□□□ 1.18
PITPNM1-212ENST00000529203 RAPGEF2Q9Y4G8 1499 aa22.42■■□□□ 1.18
PITPNM1-212ENST00000529203 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
PITPNM1-212ENST00000529203 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
PITPNM1-212ENST00000529203 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
PITPNM1-212ENST00000529203 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
PITPNM1-212ENST00000529203 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms