RNA–Protein interactions for RNA: ENST00000529178.1

SCYL1-210, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 2

Gene SCYL1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-210ENST00000529178 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
SCYL1-210ENST00000529178 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
SCYL1-210ENST00000529178 ABCC9O60706 1549 aa30.67■■■□□ 2.5
SCYL1-210ENST00000529178 NACADO15069 1562 aa29.55■■■□□ 2.32
SCYL1-210ENST00000529178 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
SCYL1-210ENST00000529178 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
SCYL1-210ENST00000529178 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
SCYL1-210ENST00000529178 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
SCYL1-210ENST00000529178 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
SCYL1-210ENST00000529178 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
SCYL1-210ENST00000529178 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
SCYL1-210ENST00000529178 BICRAQ9NZM4 1560 aa28.68■■■□□ 2.18
SCYL1-210ENST00000529178 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
SCYL1-210ENST00000529178 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
SCYL1-210ENST00000529178 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
SCYL1-210ENST00000529178 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
SCYL1-210ENST00000529178 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
SCYL1-210ENST00000529178 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
SCYL1-210ENST00000529178 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.97
SCYL1-210ENST00000529178 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
SCYL1-210ENST00000529178 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
SCYL1-210ENST00000529178 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
SCYL1-210ENST00000529178 MROH2BQ7Z745 1585 aa27.24■■□□□ 1.95
SCYL1-210ENST00000529178 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
SCYL1-210ENST00000529178 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
SCYL1-210ENST00000529178 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
SCYL1-210ENST00000529178 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
SCYL1-210ENST00000529178 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
SCYL1-210ENST00000529178 WIZO95785 1651 aa26.91■■□□□ 1.9
SCYL1-210ENST00000529178 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
SCYL1-210ENST00000529178 NESP48681 1621 aa26.57■■□□□ 1.84
SCYL1-210ENST00000529178 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SCYL1-210ENST00000529178 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
SCYL1-210ENST00000529178 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
SCYL1-210ENST00000529178 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
SCYL1-210ENST00000529178 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
SCYL1-210ENST00000529178 CFTRP13569 1480 aa26.36■■□□□ 1.81
SCYL1-210ENST00000529178 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
SCYL1-210ENST00000529178 CUX2O14529 1486 aa26.19■■□□□ 1.78
SCYL1-210ENST00000529178 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
SCYL1-210ENST00000529178 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
SCYL1-210ENST00000529178 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
SCYL1-210ENST00000529178 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
SCYL1-210ENST00000529178 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
SCYL1-210ENST00000529178 PRDM2Q13029 1718 aa26■■□□□ 1.75
SCYL1-210ENST00000529178 WDR62O43379 1518 aa25.98■■□□□ 1.75
SCYL1-210ENST00000529178 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
SCYL1-210ENST00000529178 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
SCYL1-210ENST00000529178 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
SCYL1-210ENST00000529178 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
SCYL1-210ENST00000529178 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
SCYL1-210ENST00000529178 CUX1P39880 1505 aa25.53■■□□□ 1.68
SCYL1-210ENST00000529178 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
SCYL1-210ENST00000529178 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
SCYL1-210ENST00000529178 SOGA1O94964 1423 aa25.46■■□□□ 1.67
SCYL1-210ENST00000529178 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
SCYL1-210ENST00000529178 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
SCYL1-210ENST00000529178 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
SCYL1-210ENST00000529178 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
SCYL1-210ENST00000529178 WRNQ14191 1432 aaPredicted RBP eCLIP25.4■■□□□ 1.66
SCYL1-210ENST00000529178 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.656e-10■■■■■ 52.6
SCYL1-210ENST00000529178 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
SCYL1-210ENST00000529178 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SCYL1-210ENST00000529178 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
SCYL1-210ENST00000529178 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
SCYL1-210ENST00000529178 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
SCYL1-210ENST00000529178 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
SCYL1-210ENST00000529178 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
SCYL1-210ENST00000529178 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
SCYL1-210ENST00000529178 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
SCYL1-210ENST00000529178 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
SCYL1-210ENST00000529178 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
SCYL1-210ENST00000529178 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
SCYL1-210ENST00000529178 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
SCYL1-210ENST00000529178 FBLN2P98095 1184 aa24.98■■□□□ 1.59
SCYL1-210ENST00000529178 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
SCYL1-210ENST00000529178 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
SCYL1-210ENST00000529178 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
SCYL1-210ENST00000529178 CHD1O14646 1710 aa24.93■■□□□ 1.58
SCYL1-210ENST00000529178 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
SCYL1-210ENST00000529178 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
SCYL1-210ENST00000529178 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SCYL1-210ENST00000529178 IGF1RP08069 1367 aa24.85■■□□□ 1.57
SCYL1-210ENST00000529178 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
SCYL1-210ENST00000529178 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
SCYL1-210ENST00000529178 GRIN2AQ12879 1464 aa24.78■■□□□ 1.56
SCYL1-210ENST00000529178 CLASP1Q7Z460 1538 aa24.75■■□□□ 1.55
SCYL1-210ENST00000529178 NUP160Q12769 1436 aa24.71■■□□□ 1.55
SCYL1-210ENST00000529178 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
SCYL1-210ENST00000529178 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
SCYL1-210ENST00000529178 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
SCYL1-210ENST00000529178 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
SCYL1-210ENST00000529178 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
SCYL1-210ENST00000529178 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
SCYL1-210ENST00000529178 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
SCYL1-210ENST00000529178 CUL7Q14999 1698 aa24.63■■□□□ 1.53
SCYL1-210ENST00000529178 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
SCYL1-210ENST00000529178 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
SCYL1-210ENST00000529178 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
SCYL1-210ENST00000529178 KIAA0586Q9BVV6 1533 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms