RNA–Protein interactions for RNA: ENST00000529044.5

TRIM29-213, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-213ENST00000529044 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
TRIM29-213ENST00000529044 CCDC180Q9P1Z9 1646 aa24.05■■□□□ 1.44
TRIM29-213ENST00000529044 ABCC9O60706 1549 aa23.4■■□□□ 1.34
TRIM29-213ENST00000529044 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
TRIM29-213ENST00000529044 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
TRIM29-213ENST00000529044 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
TRIM29-213ENST00000529044 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
TRIM29-213ENST00000529044 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
TRIM29-213ENST00000529044 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
TRIM29-213ENST00000529044 NACADO15069 1562 aa22.33■■□□□ 1.16
TRIM29-213ENST00000529044 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
TRIM29-213ENST00000529044 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
TRIM29-213ENST00000529044 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
TRIM29-213ENST00000529044 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
TRIM29-213ENST00000529044 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
TRIM29-213ENST00000529044 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
TRIM29-213ENST00000529044 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
TRIM29-213ENST00000529044 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
TRIM29-213ENST00000529044 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
TRIM29-213ENST00000529044 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
TRIM29-213ENST00000529044 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
TRIM29-213ENST00000529044 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
TRIM29-213ENST00000529044 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
TRIM29-213ENST00000529044 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
TRIM29-213ENST00000529044 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
TRIM29-213ENST00000529044 WIZO95785 1651 aa20.99■□□□□ 0.95
TRIM29-213ENST00000529044 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
TRIM29-213ENST00000529044 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
TRIM29-213ENST00000529044 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
TRIM29-213ENST00000529044 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
TRIM29-213ENST00000529044 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
TRIM29-213ENST00000529044 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
TRIM29-213ENST00000529044 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
TRIM29-213ENST00000529044 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
TRIM29-213ENST00000529044 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
TRIM29-213ENST00000529044 CUX2O14529 1486 aa20.36■□□□□ 0.85
TRIM29-213ENST00000529044 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
TRIM29-213ENST00000529044 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
TRIM29-213ENST00000529044 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
TRIM29-213ENST00000529044 NESP48681 1621 aa20.04■□□□□ 0.8
TRIM29-213ENST00000529044 CFTRP13569 1480 aa20.04■□□□□ 0.8
TRIM29-213ENST00000529044 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
TRIM29-213ENST00000529044 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
TRIM29-213ENST00000529044 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.79
TRIM29-213ENST00000529044 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
TRIM29-213ENST00000529044 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
TRIM29-213ENST00000529044 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
TRIM29-213ENST00000529044 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
TRIM29-213ENST00000529044 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
TRIM29-213ENST00000529044 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
TRIM29-213ENST00000529044 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
TRIM29-213ENST00000529044 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
TRIM29-213ENST00000529044 CUX1P39880 1505 aa19.76■□□□□ 0.75
TRIM29-213ENST00000529044 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
TRIM29-213ENST00000529044 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
TRIM29-213ENST00000529044 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
TRIM29-213ENST00000529044 WDR62O43379 1518 aa19.59■□□□□ 0.73
TRIM29-213ENST00000529044 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
TRIM29-213ENST00000529044 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
TRIM29-213ENST00000529044 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
TRIM29-213ENST00000529044 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
TRIM29-213ENST00000529044 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
TRIM29-213ENST00000529044 SOGA1O94964 1423 aa19.56■□□□□ 0.72
TRIM29-213ENST00000529044 EEA1Q15075 1411 aa19.55■□□□□ 0.72
TRIM29-213ENST00000529044 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
TRIM29-213ENST00000529044 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
TRIM29-213ENST00000529044 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
TRIM29-213ENST00000529044 KIF21BO75037 1637 aa19.4■□□□□ 0.7
TRIM29-213ENST00000529044 LOC105371045A0A1W2PR82 267 aa19.39■□□□□ 0.69
TRIM29-213ENST00000529044 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
TRIM29-213ENST00000529044 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
TRIM29-213ENST00000529044 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
TRIM29-213ENST00000529044 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
TRIM29-213ENST00000529044 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
TRIM29-213ENST00000529044 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
TRIM29-213ENST00000529044 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
TRIM29-213ENST00000529044 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
TRIM29-213ENST00000529044 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
TRIM29-213ENST00000529044 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
TRIM29-213ENST00000529044 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
TRIM29-213ENST00000529044 CUL7Q14999 1698 aa19.24■□□□□ 0.67
TRIM29-213ENST00000529044 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
TRIM29-213ENST00000529044 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
TRIM29-213ENST00000529044 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
TRIM29-213ENST00000529044 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
TRIM29-213ENST00000529044 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
TRIM29-213ENST00000529044 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
TRIM29-213ENST00000529044 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
TRIM29-213ENST00000529044 GAPVD1Q14C86 1478 aa19.18■□□□□ 0.66
TRIM29-213ENST00000529044 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TRIM29-213ENST00000529044 IGF1RP08069 1367 aa19.16■□□□□ 0.66
TRIM29-213ENST00000529044 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
TRIM29-213ENST00000529044 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
TRIM29-213ENST00000529044 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
TRIM29-213ENST00000529044 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
TRIM29-213ENST00000529044 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
TRIM29-213ENST00000529044 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRIM29-213ENST00000529044 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
TRIM29-213ENST00000529044 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
TRIM29-213ENST00000529044 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms