RNA–Protein interactions for RNA: ENST00000528984.5

ATG13-213, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-213ENST00000528984 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
ATG13-213ENST00000528984 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
ATG13-213ENST00000528984 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
ATG13-213ENST00000528984 ABCC9O60706 1549 aa19.77■□□□□ 0.76
ATG13-213ENST00000528984 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
ATG13-213ENST00000528984 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
ATG13-213ENST00000528984 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
ATG13-213ENST00000528984 NACADO15069 1562 aa19.48■□□□□ 0.71
ATG13-213ENST00000528984 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
ATG13-213ENST00000528984 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
ATG13-213ENST00000528984 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
ATG13-213ENST00000528984 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
ATG13-213ENST00000528984 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
ATG13-213ENST00000528984 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
ATG13-213ENST00000528984 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
ATG13-213ENST00000528984 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
ATG13-213ENST00000528984 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
ATG13-213ENST00000528984 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
ATG13-213ENST00000528984 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
ATG13-213ENST00000528984 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
ATG13-213ENST00000528984 WIZO95785 1651 aa18.29■□□□□ 0.52
ATG13-213ENST00000528984 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
ATG13-213ENST00000528984 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
ATG13-213ENST00000528984 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
ATG13-213ENST00000528984 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
ATG13-213ENST00000528984 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
ATG13-213ENST00000528984 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
ATG13-213ENST00000528984 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
ATG13-213ENST00000528984 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
ATG13-213ENST00000528984 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
ATG13-213ENST00000528984 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
ATG13-213ENST00000528984 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
ATG13-213ENST00000528984 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
ATG13-213ENST00000528984 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
ATG13-213ENST00000528984 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
ATG13-213ENST00000528984 CFTRP13569 1480 aa17.48■□□□□ 0.39
ATG13-213ENST00000528984 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
ATG13-213ENST00000528984 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
ATG13-213ENST00000528984 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.38
ATG13-213ENST00000528984 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
ATG13-213ENST00000528984 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
ATG13-213ENST00000528984 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
ATG13-213ENST00000528984 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
ATG13-213ENST00000528984 NESP48681 1621 aa17.29■□□□□ 0.36
ATG13-213ENST00000528984 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
ATG13-213ENST00000528984 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
ATG13-213ENST00000528984 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
ATG13-213ENST00000528984 CUX1P39880 1505 aa17.21■□□□□ 0.35
ATG13-213ENST00000528984 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
ATG13-213ENST00000528984 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
ATG13-213ENST00000528984 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
ATG13-213ENST00000528984 EEA1Q15075 1411 aa17.15■□□□□ 0.34
ATG13-213ENST00000528984 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
ATG13-213ENST00000528984 SOGA1O94964 1423 aa17.08■□□□□ 0.32
ATG13-213ENST00000528984 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
ATG13-213ENST00000528984 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
ATG13-213ENST00000528984 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
ATG13-213ENST00000528984 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
ATG13-213ENST00000528984 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
ATG13-213ENST00000528984 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
ATG13-213ENST00000528984 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
ATG13-213ENST00000528984 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
ATG13-213ENST00000528984 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
ATG13-213ENST00000528984 KIF21BO75037 1637 aa16.95■□□□□ 0.3
ATG13-213ENST00000528984 CUX2O14529 1486 aa16.94■□□□□ 0.3
ATG13-213ENST00000528984 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
ATG13-213ENST00000528984 WDR62O43379 1518 aa16.93■□□□□ 0.3
ATG13-213ENST00000528984 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
ATG13-213ENST00000528984 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
ATG13-213ENST00000528984 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
ATG13-213ENST00000528984 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
ATG13-213ENST00000528984 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
ATG13-213ENST00000528984 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
ATG13-213ENST00000528984 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
ATG13-213ENST00000528984 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
ATG13-213ENST00000528984 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
ATG13-213ENST00000528984 CUL7Q14999 1698 aa16.81■□□□□ 0.28
ATG13-213ENST00000528984 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
ATG13-213ENST00000528984 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
ATG13-213ENST00000528984 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
ATG13-213ENST00000528984 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
ATG13-213ENST00000528984 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.28
ATG13-213ENST00000528984 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
ATG13-213ENST00000528984 IGF1RP08069 1367 aa16.74■□□□□ 0.27
ATG13-213ENST00000528984 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
ATG13-213ENST00000528984 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
ATG13-213ENST00000528984 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
ATG13-213ENST00000528984 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
ATG13-213ENST00000528984 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
ATG13-213ENST00000528984 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
ATG13-213ENST00000528984 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATG13-213ENST00000528984 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
ATG13-213ENST00000528984 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
ATG13-213ENST00000528984 CLIP1P30622 1438 aa16.6■□□□□ 0.25
ATG13-213ENST00000528984 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
ATG13-213ENST00000528984 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
ATG13-213ENST00000528984 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
ATG13-213ENST00000528984 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
ATG13-213ENST00000528984 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.23
ATG13-213ENST00000528984 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms