RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
SOX6-210ENST00000528252 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
SOX6-210ENST00000528252 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
SOX6-210ENST00000528252 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
SOX6-210ENST00000528252 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
SOX6-210ENST00000528252 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
SOX6-210ENST00000528252 ABCC9O60706 1549 aa14.6□□□□□ -0.07
SOX6-210ENST00000528252 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
SOX6-210ENST00000528252 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
SOX6-210ENST00000528252 NACADO15069 1562 aa14.37□□□□□ -0.11
SOX6-210ENST00000528252 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
SOX6-210ENST00000528252 RB1CC1Q8TDY2 1594 aa14.21□□□□□ -0.14
SOX6-210ENST00000528252 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
SOX6-210ENST00000528252 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
SOX6-210ENST00000528252 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
SOX6-210ENST00000528252 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
SOX6-210ENST00000528252 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
SOX6-210ENST00000528252 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
SOX6-210ENST00000528252 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
SOX6-210ENST00000528252 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
SOX6-210ENST00000528252 WIZO95785 1651 aa13.77□□□□□ -0.21
SOX6-210ENST00000528252 SMARCA4P51532 1647 aa13.71□□□□□ -0.22
SOX6-210ENST00000528252 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
SOX6-210ENST00000528252 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
SOX6-210ENST00000528252 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.24
SOX6-210ENST00000528252 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
SOX6-210ENST00000528252 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
SOX6-210ENST00000528252 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
SOX6-210ENST00000528252 LOC105371045A0A1W2PR82 267 aa13.47□□□□□ -0.25
SOX6-210ENST00000528252 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
SOX6-210ENST00000528252 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
SOX6-210ENST00000528252 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
SOX6-210ENST00000528252 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
SOX6-210ENST00000528252 HRCP23327 699 aa13.32□□□□□ -0.28
SOX6-210ENST00000528252 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
SOX6-210ENST00000528252 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
SOX6-210ENST00000528252 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
SOX6-210ENST00000528252 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
SOX6-210ENST00000528252 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SOX6-210ENST00000528252 SOGA1O94964 1423 aa13.15□□□□□ -0.3
SOX6-210ENST00000528252 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
SOX6-210ENST00000528252 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
SOX6-210ENST00000528252 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
SOX6-210ENST00000528252 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
SOX6-210ENST00000528252 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
SOX6-210ENST00000528252 CFTRP13569 1480 aa13.08□□□□□ -0.32
SOX6-210ENST00000528252 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
SOX6-210ENST00000528252 EEA1Q15075 1411 aa13.06□□□□□ -0.32
SOX6-210ENST00000528252 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.32
SOX6-210ENST00000528252 TOP2BQ02880 1626 aa13□□□□□ -0.33
SOX6-210ENST00000528252 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
SOX6-210ENST00000528252 CUX1P39880 1505 aa12.96□□□□□ -0.33
SOX6-210ENST00000528252 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
SOX6-210ENST00000528252 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
SOX6-210ENST00000528252 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
SOX6-210ENST00000528252 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
SOX6-210ENST00000528252 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
SOX6-210ENST00000528252 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
SOX6-210ENST00000528252 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
SOX6-210ENST00000528252 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
SOX6-210ENST00000528252 NESP48681 1621 aa12.88□□□□□ -0.35
SOX6-210ENST00000528252 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
SOX6-210ENST00000528252 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
SOX6-210ENST00000528252 KIF21BO75037 1637 aa12.85□□□□□ -0.35
SOX6-210ENST00000528252 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
SOX6-210ENST00000528252 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
SOX6-210ENST00000528252 MYT1Q01538 1121 aa12.84□□□□□ -0.35
SOX6-210ENST00000528252 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
SOX6-210ENST00000528252 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
SOX6-210ENST00000528252 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
SOX6-210ENST00000528252 CUX2O14529 1486 aa12.78□□□□□ -0.36
SOX6-210ENST00000528252 RANGAP1P46060 587 aaPredicted RBP12.78□□□□□ -0.36
SOX6-210ENST00000528252 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
SOX6-210ENST00000528252 CLIP1P30622 1438 aa12.76□□□□□ -0.37
SOX6-210ENST00000528252 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
SOX6-210ENST00000528252 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
SOX6-210ENST00000528252 IGF1RP08069 1367 aa12.74□□□□□ -0.37
SOX6-210ENST00000528252 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
SOX6-210ENST00000528252 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
SOX6-210ENST00000528252 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
SOX6-210ENST00000528252 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
SOX6-210ENST00000528252 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.37
SOX6-210ENST00000528252 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
SOX6-210ENST00000528252 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SOX6-210ENST00000528252 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
SOX6-210ENST00000528252 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
SOX6-210ENST00000528252 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
SOX6-210ENST00000528252 APLP2Q06481 763 aa12.61□□□□□ -0.39
SOX6-210ENST00000528252 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
SOX6-210ENST00000528252 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
SOX6-210ENST00000528252 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
SOX6-210ENST00000528252 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
SOX6-210ENST00000528252 GAPVD1Q14C86 1478 aa12.54□□□□□ -0.4
SOX6-210ENST00000528252 WDR97A6NE52 1622 aa12.52□□□□□ -0.41
SOX6-210ENST00000528252 ABCA5Q8WWZ7 1642 aa12.5□□□□□ -0.41
SOX6-210ENST00000528252 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
SOX6-210ENST00000528252 CUL7Q14999 1698 aa12.49□□□□□ -0.41
SOX6-210ENST00000528252 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
SOX6-210ENST00000528252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
SOX6-210ENST00000528252 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms