RNA–Protein interactions for RNA: ENST00000528237.5

MKNK1-221, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 4

Gene MKNK1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-221ENST00000528237 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
MKNK1-221ENST00000528237 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
MKNK1-221ENST00000528237 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
MKNK1-221ENST00000528237 ABCC9O60706 1549 aa23.38■■□□□ 1.33
MKNK1-221ENST00000528237 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
MKNK1-221ENST00000528237 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
MKNK1-221ENST00000528237 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
MKNK1-221ENST00000528237 NACADO15069 1562 aa22.88■■□□□ 1.25
MKNK1-221ENST00000528237 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
MKNK1-221ENST00000528237 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
MKNK1-221ENST00000528237 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
MKNK1-221ENST00000528237 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
MKNK1-221ENST00000528237 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
MKNK1-221ENST00000528237 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
MKNK1-221ENST00000528237 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
MKNK1-221ENST00000528237 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
MKNK1-221ENST00000528237 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
MKNK1-221ENST00000528237 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
MKNK1-221ENST00000528237 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
MKNK1-221ENST00000528237 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
MKNK1-221ENST00000528237 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
MKNK1-221ENST00000528237 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
MKNK1-221ENST00000528237 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
MKNK1-221ENST00000528237 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
MKNK1-221ENST00000528237 WIZO95785 1651 aa21.24■□□□□ 0.99
MKNK1-221ENST00000528237 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
MKNK1-221ENST00000528237 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
MKNK1-221ENST00000528237 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
MKNK1-221ENST00000528237 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
MKNK1-221ENST00000528237 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
MKNK1-221ENST00000528237 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
MKNK1-221ENST00000528237 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
MKNK1-221ENST00000528237 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
MKNK1-221ENST00000528237 CFTRP13569 1480 aa20.59■□□□□ 0.89
MKNK1-221ENST00000528237 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
MKNK1-221ENST00000528237 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
MKNK1-221ENST00000528237 NESP48681 1621 aa20.42■□□□□ 0.86
MKNK1-221ENST00000528237 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
MKNK1-221ENST00000528237 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
MKNK1-221ENST00000528237 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
MKNK1-221ENST00000528237 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
MKNK1-221ENST00000528237 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
MKNK1-221ENST00000528237 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
MKNK1-221ENST00000528237 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
MKNK1-221ENST00000528237 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
MKNK1-221ENST00000528237 CUX1P39880 1505 aa20.14■□□□□ 0.81
MKNK1-221ENST00000528237 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
MKNK1-221ENST00000528237 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
MKNK1-221ENST00000528237 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
MKNK1-221ENST00000528237 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
MKNK1-221ENST00000528237 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
MKNK1-221ENST00000528237 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
MKNK1-221ENST00000528237 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
MKNK1-221ENST00000528237 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
MKNK1-221ENST00000528237 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
MKNK1-221ENST00000528237 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
MKNK1-221ENST00000528237 WDR62O43379 1518 aa19.96■□□□□ 0.79
MKNK1-221ENST00000528237 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
MKNK1-221ENST00000528237 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
MKNK1-221ENST00000528237 SOGA1O94964 1423 aa19.9■□□□□ 0.78
MKNK1-221ENST00000528237 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
MKNK1-221ENST00000528237 EEA1Q15075 1411 aa19.85■□□□□ 0.77
MKNK1-221ENST00000528237 CUX2O14529 1486 aa19.84■□□□□ 0.77
MKNK1-221ENST00000528237 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
MKNK1-221ENST00000528237 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
MKNK1-221ENST00000528237 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
MKNK1-221ENST00000528237 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
MKNK1-221ENST00000528237 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
MKNK1-221ENST00000528237 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
MKNK1-221ENST00000528237 TARBP1Q13395 1621 aaKnown RBP19.75■□□□□ 0.75
MKNK1-221ENST00000528237 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
MKNK1-221ENST00000528237 IGF1RP08069 1367 aa19.69■□□□□ 0.74
MKNK1-221ENST00000528237 WDR97A6NE52 1622 aa19.68■□□□□ 0.74
MKNK1-221ENST00000528237 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
MKNK1-221ENST00000528237 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
MKNK1-221ENST00000528237 ABCA5Q8WWZ7 1642 aa19.63■□□□□ 0.73
MKNK1-221ENST00000528237 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.737e-6■■□□□ 12.2
MKNK1-221ENST00000528237 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
MKNK1-221ENST00000528237 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
MKNK1-221ENST00000528237 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
MKNK1-221ENST00000528237 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
MKNK1-221ENST00000528237 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
MKNK1-221ENST00000528237 KIF21BO75037 1637 aa19.52■□□□□ 0.72
MKNK1-221ENST00000528237 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
MKNK1-221ENST00000528237 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
MKNK1-221ENST00000528237 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
MKNK1-221ENST00000528237 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
MKNK1-221ENST00000528237 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
MKNK1-221ENST00000528237 CUL7Q14999 1698 aa19.44■□□□□ 0.7
MKNK1-221ENST00000528237 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
MKNK1-221ENST00000528237 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
MKNK1-221ENST00000528237 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
MKNK1-221ENST00000528237 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
MKNK1-221ENST00000528237 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
MKNK1-221ENST00000528237 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
MKNK1-221ENST00000528237 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
MKNK1-221ENST00000528237 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
MKNK1-221ENST00000528237 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
MKNK1-221ENST00000528237 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
MKNK1-221ENST00000528237 FBLN2P98095 1184 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms