RNA–Protein interactions for RNA: ENST00000528158.2

NCAM1-208, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5

Gene NCAM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-208ENST00000528158 NISCHQ9Y2I1 1504 aa31.99■■■□□ 2.71
NCAM1-208ENST00000528158 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
NCAM1-208ENST00000528158 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
NCAM1-208ENST00000528158 ABCC9O60706 1549 aa26.53■■□□□ 1.84
NCAM1-208ENST00000528158 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
NCAM1-208ENST00000528158 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
NCAM1-208ENST00000528158 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
NCAM1-208ENST00000528158 NACADO15069 1562 aa26.13■■□□□ 1.77
NCAM1-208ENST00000528158 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
NCAM1-208ENST00000528158 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
NCAM1-208ENST00000528158 SCRIBQ14160 1630 aa25.64■■□□□ 1.7
NCAM1-208ENST00000528158 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
NCAM1-208ENST00000528158 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
NCAM1-208ENST00000528158 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
NCAM1-208ENST00000528158 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
NCAM1-208ENST00000528158 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
NCAM1-208ENST00000528158 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
NCAM1-208ENST00000528158 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
NCAM1-208ENST00000528158 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
NCAM1-208ENST00000528158 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
NCAM1-208ENST00000528158 WIZO95785 1651 aa24.47■■□□□ 1.51
NCAM1-208ENST00000528158 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
NCAM1-208ENST00000528158 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
NCAM1-208ENST00000528158 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
NCAM1-208ENST00000528158 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
NCAM1-208ENST00000528158 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
NCAM1-208ENST00000528158 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
NCAM1-208ENST00000528158 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
NCAM1-208ENST00000528158 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
NCAM1-208ENST00000528158 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
NCAM1-208ENST00000528158 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
NCAM1-208ENST00000528158 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
NCAM1-208ENST00000528158 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
NCAM1-208ENST00000528158 CFTRP13569 1480 aa23.52■■□□□ 1.36
NCAM1-208ENST00000528158 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
NCAM1-208ENST00000528158 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
NCAM1-208ENST00000528158 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
NCAM1-208ENST00000528158 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
NCAM1-208ENST00000528158 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
NCAM1-208ENST00000528158 NESP48681 1621 aa23.26■■□□□ 1.31
NCAM1-208ENST00000528158 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
NCAM1-208ENST00000528158 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
NCAM1-208ENST00000528158 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
NCAM1-208ENST00000528158 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
NCAM1-208ENST00000528158 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
NCAM1-208ENST00000528158 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
NCAM1-208ENST00000528158 CUX1P39880 1505 aa23.1■■□□□ 1.29
NCAM1-208ENST00000528158 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
NCAM1-208ENST00000528158 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
NCAM1-208ENST00000528158 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
NCAM1-208ENST00000528158 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
NCAM1-208ENST00000528158 URB2Q14146 1524 aaKnown RBP22.91■■□□□ 1.26
NCAM1-208ENST00000528158 SOGA1O94964 1423 aa22.87■■□□□ 1.25
NCAM1-208ENST00000528158 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
NCAM1-208ENST00000528158 EEA1Q15075 1411 aa22.85■■□□□ 1.25
NCAM1-208ENST00000528158 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
NCAM1-208ENST00000528158 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
NCAM1-208ENST00000528158 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
NCAM1-208ENST00000528158 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
NCAM1-208ENST00000528158 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
NCAM1-208ENST00000528158 WDR62O43379 1518 aa22.76■■□□□ 1.23
NCAM1-208ENST00000528158 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
NCAM1-208ENST00000528158 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
NCAM1-208ENST00000528158 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
NCAM1-208ENST00000528158 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
NCAM1-208ENST00000528158 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
NCAM1-208ENST00000528158 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
NCAM1-208ENST00000528158 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
NCAM1-208ENST00000528158 CUX2O14529 1486 aa22.64■■□□□ 1.21
NCAM1-208ENST00000528158 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
NCAM1-208ENST00000528158 KIF21BO75037 1637 aa22.58■■□□□ 1.2
NCAM1-208ENST00000528158 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
NCAM1-208ENST00000528158 PRXQ9BXM0 1461 aa22.53■■□□□ 1.2
NCAM1-208ENST00000528158 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
NCAM1-208ENST00000528158 IGF1RP08069 1367 aa22.51■■□□□ 1.19
NCAM1-208ENST00000528158 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
NCAM1-208ENST00000528158 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
NCAM1-208ENST00000528158 HRCP23327 699 aa22.48■■□□□ 1.19
NCAM1-208ENST00000528158 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
NCAM1-208ENST00000528158 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
NCAM1-208ENST00000528158 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
NCAM1-208ENST00000528158 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
NCAM1-208ENST00000528158 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.18
NCAM1-208ENST00000528158 CUL7Q14999 1698 aa22.39■■□□□ 1.17
NCAM1-208ENST00000528158 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
NCAM1-208ENST00000528158 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
NCAM1-208ENST00000528158 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
NCAM1-208ENST00000528158 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.17
NCAM1-208ENST00000528158 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
NCAM1-208ENST00000528158 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
NCAM1-208ENST00000528158 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
NCAM1-208ENST00000528158 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
NCAM1-208ENST00000528158 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
NCAM1-208ENST00000528158 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
NCAM1-208ENST00000528158 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
NCAM1-208ENST00000528158 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
NCAM1-208ENST00000528158 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
NCAM1-208ENST00000528158 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
NCAM1-208ENST00000528158 CLIP1P30622 1438 aa22.1■■□□□ 1.13
NCAM1-208ENST00000528158 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms