RNA–Protein interactions for RNA: ENST00000528064.5

GRHL3-207, Transcript of grainyhead like transcription factor 3, humanhuman

TSL 1 (best)

Gene GRHL3, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-207ENST00000528064 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
GRHL3-207ENST00000528064 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
GRHL3-207ENST00000528064 ABCC9O60706 1549 aa27.28■■□□□ 1.96
GRHL3-207ENST00000528064 ZCCHC6Q5VYS8 1495 aaKnown RBP26.43■■□□□ 1.82
GRHL3-207ENST00000528064 NACADO15069 1562 aa26.33■■□□□ 1.81
GRHL3-207ENST00000528064 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
GRHL3-207ENST00000528064 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
GRHL3-207ENST00000528064 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
GRHL3-207ENST00000528064 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.78
GRHL3-207ENST00000528064 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
GRHL3-207ENST00000528064 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
GRHL3-207ENST00000528064 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
GRHL3-207ENST00000528064 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
GRHL3-207ENST00000528064 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
GRHL3-207ENST00000528064 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
GRHL3-207ENST00000528064 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
GRHL3-207ENST00000528064 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
GRHL3-207ENST00000528064 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
GRHL3-207ENST00000528064 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
GRHL3-207ENST00000528064 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
GRHL3-207ENST00000528064 MROH2BQ7Z745 1585 aa24.43■■□□□ 1.5
GRHL3-207ENST00000528064 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
GRHL3-207ENST00000528064 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
GRHL3-207ENST00000528064 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
GRHL3-207ENST00000528064 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
GRHL3-207ENST00000528064 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
GRHL3-207ENST00000528064 WIZO95785 1651 aa24.2■■□□□ 1.46
GRHL3-207ENST00000528064 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
GRHL3-207ENST00000528064 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
GRHL3-207ENST00000528064 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
GRHL3-207ENST00000528064 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
GRHL3-207ENST00000528064 NESP48681 1621 aa23.69■■□□□ 1.38
GRHL3-207ENST00000528064 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
GRHL3-207ENST00000528064 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
GRHL3-207ENST00000528064 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
GRHL3-207ENST00000528064 CFTRP13569 1480 aa23.5■■□□□ 1.35
GRHL3-207ENST00000528064 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
GRHL3-207ENST00000528064 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.35
GRHL3-207ENST00000528064 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
GRHL3-207ENST00000528064 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
GRHL3-207ENST00000528064 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.32
GRHL3-207ENST00000528064 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
GRHL3-207ENST00000528064 CEP164Q9UPV0 1460 aa23.27■■□□□ 1.32
GRHL3-207ENST00000528064 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
GRHL3-207ENST00000528064 CUX2O14529 1486 aa23.15■■□□□ 1.3
GRHL3-207ENST00000528064 WDR62O43379 1518 aa23.14■■□□□ 1.29
GRHL3-207ENST00000528064 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
GRHL3-207ENST00000528064 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
GRHL3-207ENST00000528064 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
GRHL3-207ENST00000528064 ABCC8Q09428 1581 aa22.95■■□□□ 1.27
GRHL3-207ENST00000528064 CUX1P39880 1505 aa22.9■■□□□ 1.26
GRHL3-207ENST00000528064 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
GRHL3-207ENST00000528064 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
GRHL3-207ENST00000528064 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
GRHL3-207ENST00000528064 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
GRHL3-207ENST00000528064 BIVM-ERCC5R4GMW8 1640 aa22.77■■□□□ 1.24
GRHL3-207ENST00000528064 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
GRHL3-207ENST00000528064 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
GRHL3-207ENST00000528064 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
GRHL3-207ENST00000528064 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
GRHL3-207ENST00000528064 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
GRHL3-207ENST00000528064 SOGA1O94964 1423 aa22.69■■□□□ 1.22
GRHL3-207ENST00000528064 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
GRHL3-207ENST00000528064 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
GRHL3-207ENST00000528064 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.2
GRHL3-207ENST00000528064 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
GRHL3-207ENST00000528064 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
GRHL3-207ENST00000528064 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
GRHL3-207ENST00000528064 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
GRHL3-207ENST00000528064 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
GRHL3-207ENST00000528064 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
GRHL3-207ENST00000528064 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
GRHL3-207ENST00000528064 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
GRHL3-207ENST00000528064 CHD1O14646 1710 aa22.33■■□□□ 1.17
GRHL3-207ENST00000528064 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
GRHL3-207ENST00000528064 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
GRHL3-207ENST00000528064 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
GRHL3-207ENST00000528064 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
GRHL3-207ENST00000528064 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
GRHL3-207ENST00000528064 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
GRHL3-207ENST00000528064 FBLN2P98095 1184 aa22.22■■□□□ 1.15
GRHL3-207ENST00000528064 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
GRHL3-207ENST00000528064 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
GRHL3-207ENST00000528064 OSCARQ8IYS5 282 aa22.2■■□□□ 1.15
GRHL3-207ENST00000528064 IGF1RP08069 1367 aa22.19■■□□□ 1.14
GRHL3-207ENST00000528064 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
GRHL3-207ENST00000528064 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
GRHL3-207ENST00000528064 CUL7Q14999 1698 aa22.14■■□□□ 1.13
GRHL3-207ENST00000528064 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
GRHL3-207ENST00000528064 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
GRHL3-207ENST00000528064 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
GRHL3-207ENST00000528064 CARMIL1Q5VZK9 1371 aa22.04■■□□□ 1.12
GRHL3-207ENST00000528064 NUP160Q12769 1436 aa22.03■■□□□ 1.12
GRHL3-207ENST00000528064 EEA1Q15075 1411 aa21.96■■□□□ 1.11
GRHL3-207ENST00000528064 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
GRHL3-207ENST00000528064 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
GRHL3-207ENST00000528064 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
GRHL3-207ENST00000528064 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
GRHL3-207ENST00000528064 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
GRHL3-207ENST00000528064 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms