RNA–Protein interactions for RNA: ENST00000527982.1

PSMD13-207, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

Gene PSMD13, Length 2,200 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-207ENST00000527982 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
PSMD13-207ENST00000527982 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
PSMD13-207ENST00000527982 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
PSMD13-207ENST00000527982 ABCC9O60706 1549 aa22.09■■□□□ 1.13
PSMD13-207ENST00000527982 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
PSMD13-207ENST00000527982 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
PSMD13-207ENST00000527982 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
PSMD13-207ENST00000527982 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
PSMD13-207ENST00000527982 NACADO15069 1562 aa21.6■■□□□ 1.05
PSMD13-207ENST00000527982 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
PSMD13-207ENST00000527982 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
PSMD13-207ENST00000527982 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
PSMD13-207ENST00000527982 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
PSMD13-207ENST00000527982 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.93
PSMD13-207ENST00000527982 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
PSMD13-207ENST00000527982 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
PSMD13-207ENST00000527982 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
PSMD13-207ENST00000527982 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
PSMD13-207ENST00000527982 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
PSMD13-207ENST00000527982 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
PSMD13-207ENST00000527982 WIZO95785 1651 aa20.34■□□□□ 0.85
PSMD13-207ENST00000527982 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
PSMD13-207ENST00000527982 PEG3Q9GZU2 1588 aa20.16■□□□□ 0.82
PSMD13-207ENST00000527982 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
PSMD13-207ENST00000527982 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
PSMD13-207ENST00000527982 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
PSMD13-207ENST00000527982 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
PSMD13-207ENST00000527982 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
PSMD13-207ENST00000527982 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
PSMD13-207ENST00000527982 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
PSMD13-207ENST00000527982 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
PSMD13-207ENST00000527982 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
PSMD13-207ENST00000527982 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
PSMD13-207ENST00000527982 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
PSMD13-207ENST00000527982 CFTRP13569 1480 aa19.51■□□□□ 0.71
PSMD13-207ENST00000527982 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
PSMD13-207ENST00000527982 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
PSMD13-207ENST00000527982 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
PSMD13-207ENST00000527982 NESP48681 1621 aa19.37■□□□□ 0.69
PSMD13-207ENST00000527982 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
PSMD13-207ENST00000527982 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
PSMD13-207ENST00000527982 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
PSMD13-207ENST00000527982 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
PSMD13-207ENST00000527982 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
PSMD13-207ENST00000527982 CUX1P39880 1505 aa19.2■□□□□ 0.66
PSMD13-207ENST00000527982 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
PSMD13-207ENST00000527982 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
PSMD13-207ENST00000527982 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
PSMD13-207ENST00000527982 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
PSMD13-207ENST00000527982 SOGA1O94964 1423 aa19.13■□□□□ 0.65
PSMD13-207ENST00000527982 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
PSMD13-207ENST00000527982 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
PSMD13-207ENST00000527982 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
PSMD13-207ENST00000527982 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
PSMD13-207ENST00000527982 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
PSMD13-207ENST00000527982 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
PSMD13-207ENST00000527982 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
PSMD13-207ENST00000527982 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
PSMD13-207ENST00000527982 EEA1Q15075 1411 aa18.98■□□□□ 0.63
PSMD13-207ENST00000527982 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PSMD13-207ENST00000527982 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
PSMD13-207ENST00000527982 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
PSMD13-207ENST00000527982 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
PSMD13-207ENST00000527982 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
PSMD13-207ENST00000527982 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
PSMD13-207ENST00000527982 CUX2O14529 1486 aa18.87■□□□□ 0.61
PSMD13-207ENST00000527982 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
PSMD13-207ENST00000527982 WDR62O43379 1518 aa18.81■□□□□ 0.6
PSMD13-207ENST00000527982 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
PSMD13-207ENST00000527982 IGF1RP08069 1367 aa18.76■□□□□ 0.59
PSMD13-207ENST00000527982 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
PSMD13-207ENST00000527982 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
PSMD13-207ENST00000527982 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
PSMD13-207ENST00000527982 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
PSMD13-207ENST00000527982 KIF21BO75037 1637 aa18.73■□□□□ 0.59
PSMD13-207ENST00000527982 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
PSMD13-207ENST00000527982 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
PSMD13-207ENST00000527982 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
PSMD13-207ENST00000527982 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
PSMD13-207ENST00000527982 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
PSMD13-207ENST00000527982 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
PSMD13-207ENST00000527982 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
PSMD13-207ENST00000527982 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
PSMD13-207ENST00000527982 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■■■□ 20.4
PSMD13-207ENST00000527982 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
PSMD13-207ENST00000527982 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
PSMD13-207ENST00000527982 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
PSMD13-207ENST00000527982 CUL7Q14999 1698 aa18.53■□□□□ 0.56
PSMD13-207ENST00000527982 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
PSMD13-207ENST00000527982 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
PSMD13-207ENST00000527982 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
PSMD13-207ENST00000527982 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
PSMD13-207ENST00000527982 CLIP1P30622 1438 aa18.46■□□□□ 0.55
PSMD13-207ENST00000527982 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
PSMD13-207ENST00000527982 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
PSMD13-207ENST00000527982 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
PSMD13-207ENST00000527982 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PSMD13-207ENST00000527982 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
PSMD13-207ENST00000527982 FBLN2P98095 1184 aa18.32■□□□□ 0.52
PSMD13-207ENST00000527982 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms