RNA–Protein interactions for RNA: ENST00000527874.1

RELA-212, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-212ENST00000527874 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
RELA-212ENST00000527874 ABCC9O60706 1549 aa19■□□□□ 0.63
RELA-212ENST00000527874 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
RELA-212ENST00000527874 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RELA-212ENST00000527874 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
RELA-212ENST00000527874 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
RELA-212ENST00000527874 NACADO15069 1562 aa17.79■□□□□ 0.44
RELA-212ENST00000527874 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
RELA-212ENST00000527874 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
RELA-212ENST00000527874 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
RELA-212ENST00000527874 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
RELA-212ENST00000527874 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
RELA-212ENST00000527874 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
RELA-212ENST00000527874 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
RELA-212ENST00000527874 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
RELA-212ENST00000527874 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
RELA-212ENST00000527874 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
RELA-212ENST00000527874 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
RELA-212ENST00000527874 CUX2O14529 1486 aa16.89■□□□□ 0.29
RELA-212ENST00000527874 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
RELA-212ENST00000527874 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
RELA-212ENST00000527874 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
RELA-212ENST00000527874 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
RELA-212ENST00000527874 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
RELA-212ENST00000527874 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
RELA-212ENST00000527874 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
RELA-212ENST00000527874 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
RELA-212ENST00000527874 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
RELA-212ENST00000527874 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
RELA-212ENST00000527874 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
RELA-212ENST00000527874 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
RELA-212ENST00000527874 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
RELA-212ENST00000527874 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
RELA-212ENST00000527874 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
RELA-212ENST00000527874 WIZO95785 1651 aa16.11■□□□□ 0.17
RELA-212ENST00000527874 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
RELA-212ENST00000527874 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
RELA-212ENST00000527874 NESP48681 1621 aa15.97■□□□□ 0.15
RELA-212ENST00000527874 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
RELA-212ENST00000527874 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
RELA-212ENST00000527874 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
RELA-212ENST00000527874 CFTRP13569 1480 aa15.84■□□□□ 0.13
RELA-212ENST00000527874 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
RELA-212ENST00000527874 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
RELA-212ENST00000527874 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
RELA-212ENST00000527874 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
RELA-212ENST00000527874 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
RELA-212ENST00000527874 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
RELA-212ENST00000527874 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
RELA-212ENST00000527874 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
RELA-212ENST00000527874 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
RELA-212ENST00000527874 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
RELA-212ENST00000527874 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
RELA-212ENST00000527874 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
RELA-212ENST00000527874 WDR62O43379 1518 aa15.64■□□□□ 0.09
RELA-212ENST00000527874 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
RELA-212ENST00000527874 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
RELA-212ENST00000527874 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
RELA-212ENST00000527874 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
RELA-212ENST00000527874 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
RELA-212ENST00000527874 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
RELA-212ENST00000527874 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
RELA-212ENST00000527874 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
RELA-212ENST00000527874 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
RELA-212ENST00000527874 CUX1P39880 1505 aa15.33■□□□□ 0.04
RELA-212ENST00000527874 POLA1P09884 1462 aaPredicted RBP15.32■□□□□ 0.04
RELA-212ENST00000527874 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
RELA-212ENST00000527874 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
RELA-212ENST00000527874 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
RELA-212ENST00000527874 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
RELA-212ENST00000527874 FGD5Q6ZNL6 1462 aa15.24■□□□□ 0.03
RELA-212ENST00000527874 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
RELA-212ENST00000527874 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
RELA-212ENST00000527874 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
RELA-212ENST00000527874 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
RELA-212ENST00000527874 SOGA1O94964 1423 aa15.18■□□□□ 0.02
RELA-212ENST00000527874 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
RELA-212ENST00000527874 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
RELA-212ENST00000527874 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
RELA-212ENST00000527874 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
RELA-212ENST00000527874 CHD1O14646 1710 aa15.12■□□□□ 0.01
RELA-212ENST00000527874 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.013e-9■■■■■ 31.5
RELA-212ENST00000527874 FBLN2P98095 1184 aa15.06■□□□□ 0
RELA-212ENST00000527874 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
RELA-212ENST00000527874 GRIN2BQ13224 1484 aa15.06■□□□□ 0
RELA-212ENST00000527874 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
RELA-212ENST00000527874 EEA1Q15075 1411 aa15.05■□□□□ -0
RELA-212ENST00000527874 GAPVD1Q14C86 1478 aa15.04■□□□□ -0
RELA-212ENST00000527874 FAM9AQ8IZU1 332 aaPredicted RBP15.04■□□□□ -0
RELA-212ENST00000527874 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
RELA-212ENST00000527874 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
RELA-212ENST00000527874 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
RELA-212ENST00000527874 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
RELA-212ENST00000527874 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
RELA-212ENST00000527874 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
RELA-212ENST00000527874 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
RELA-212ENST00000527874 KDM4FA0A1W2PPD8 638 aa14.93□□□□□ -0.02
RELA-212ENST00000527874 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
RELA-212ENST00000527874 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
RELA-212ENST00000527874 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms