RNA–Protein interactions for RNA: ENST00000527868.1

IFT46-204, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-204ENST00000527868 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
IFT46-204ENST00000527868 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
IFT46-204ENST00000527868 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
IFT46-204ENST00000527868 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
IFT46-204ENST00000527868 ABCC9O60706 1549 aa18.89■□□□□ 0.61
IFT46-204ENST00000527868 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
IFT46-204ENST00000527868 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
IFT46-204ENST00000527868 NACADO15069 1562 aa18.25■□□□□ 0.51
IFT46-204ENST00000527868 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
IFT46-204ENST00000527868 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
IFT46-204ENST00000527868 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
IFT46-204ENST00000527868 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
IFT46-204ENST00000527868 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
IFT46-204ENST00000527868 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
IFT46-204ENST00000527868 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
IFT46-204ENST00000527868 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
IFT46-204ENST00000527868 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
IFT46-204ENST00000527868 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
IFT46-204ENST00000527868 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
IFT46-204ENST00000527868 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
IFT46-204ENST00000527868 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
IFT46-204ENST00000527868 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
IFT46-204ENST00000527868 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
IFT46-204ENST00000527868 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
IFT46-204ENST00000527868 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
IFT46-204ENST00000527868 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
IFT46-204ENST00000527868 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
IFT46-204ENST00000527868 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
IFT46-204ENST00000527868 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
IFT46-204ENST00000527868 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
IFT46-204ENST00000527868 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
IFT46-204ENST00000527868 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
IFT46-204ENST00000527868 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
IFT46-204ENST00000527868 WIZO95785 1651 aa16.65■□□□□ 0.26
IFT46-204ENST00000527868 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
IFT46-204ENST00000527868 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
IFT46-204ENST00000527868 NESP48681 1621 aa16.37■□□□□ 0.21
IFT46-204ENST00000527868 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
IFT46-204ENST00000527868 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
IFT46-204ENST00000527868 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
IFT46-204ENST00000527868 FOXD1Q16676 465 aa16.27■□□□□ 0.2
IFT46-204ENST00000527868 CFTRP13569 1480 aa16.27■□□□□ 0.19
IFT46-204ENST00000527868 PDS5BQ9NTI5 1447 aa16.25■□□□□ 0.19
IFT46-204ENST00000527868 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
IFT46-204ENST00000527868 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
IFT46-204ENST00000527868 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
IFT46-204ENST00000527868 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
IFT46-204ENST00000527868 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
IFT46-204ENST00000527868 CUX2O14529 1486 aa16.13■□□□□ 0.17
IFT46-204ENST00000527868 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
IFT46-204ENST00000527868 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
IFT46-204ENST00000527868 WDR62O43379 1518 aa16.05■□□□□ 0.16
IFT46-204ENST00000527868 ADRA2BP18089 450 aa16.03■□□□□ 0.16
IFT46-204ENST00000527868 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
IFT46-204ENST00000527868 URB2Q14146 1524 aaKnown RBP15.98■□□□□ 0.15
IFT46-204ENST00000527868 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
IFT46-204ENST00000527868 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
IFT46-204ENST00000527868 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
IFT46-204ENST00000527868 CUX1P39880 1505 aa15.8■□□□□ 0.12
IFT46-204ENST00000527868 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
IFT46-204ENST00000527868 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
IFT46-204ENST00000527868 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
IFT46-204ENST00000527868 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
IFT46-204ENST00000527868 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
IFT46-204ENST00000527868 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
IFT46-204ENST00000527868 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
IFT46-204ENST00000527868 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
IFT46-204ENST00000527868 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
IFT46-204ENST00000527868 SOGA1O94964 1423 aa15.68■□□□□ 0.1
IFT46-204ENST00000527868 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
IFT46-204ENST00000527868 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
IFT46-204ENST00000527868 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
IFT46-204ENST00000527868 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
IFT46-204ENST00000527868 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
IFT46-204ENST00000527868 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
IFT46-204ENST00000527868 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
IFT46-204ENST00000527868 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
IFT46-204ENST00000527868 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.07
IFT46-204ENST00000527868 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
IFT46-204ENST00000527868 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
IFT46-204ENST00000527868 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
IFT46-204ENST00000527868 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
IFT46-204ENST00000527868 CHD1O14646 1710 aa15.43■□□□□ 0.06
IFT46-204ENST00000527868 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
IFT46-204ENST00000527868 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
IFT46-204ENST00000527868 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
IFT46-204ENST00000527868 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
IFT46-204ENST00000527868 ADAMTS12P58397 1594 aa15.39■□□□□ 0.05
IFT46-204ENST00000527868 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
IFT46-204ENST00000527868 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
IFT46-204ENST00000527868 FBLN2P98095 1184 aa15.34■□□□□ 0.05
IFT46-204ENST00000527868 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
IFT46-204ENST00000527868 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
IFT46-204ENST00000527868 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
IFT46-204ENST00000527868 IGF1RP08069 1367 aa15.3■□□□□ 0.04
IFT46-204ENST00000527868 CUL7Q14999 1698 aa15.3■□□□□ 0.04
IFT46-204ENST00000527868 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
IFT46-204ENST00000527868 NUP160Q12769 1436 aa15.26■□□□□ 0.03
IFT46-204ENST00000527868 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
IFT46-204ENST00000527868 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms