RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 NISCHQ9Y2I1 1504 aa39.88■■■■□ 3.97
SSH3-205ENST00000527821 CCDC180Q9P1Z9 1646 aa35.42■■■■□ 3.26
SSH3-205ENST00000527821 ABCC9O60706 1549 aa34.58■■■■□ 3.13
SSH3-205ENST00000527821 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
SSH3-205ENST00000527821 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
SSH3-205ENST00000527821 NACADO15069 1562 aa33.26■■■□□ 2.92
SSH3-205ENST00000527821 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
SSH3-205ENST00000527821 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
SSH3-205ENST00000527821 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
SSH3-205ENST00000527821 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
SSH3-205ENST00000527821 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
SSH3-205ENST00000527821 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
SSH3-205ENST00000527821 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
SSH3-205ENST00000527821 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
SSH3-205ENST00000527821 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
SSH3-205ENST00000527821 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
SSH3-205ENST00000527821 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
SSH3-205ENST00000527821 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
SSH3-205ENST00000527821 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
SSH3-205ENST00000527821 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
SSH3-205ENST00000527821 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
SSH3-205ENST00000527821 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
SSH3-205ENST00000527821 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
SSH3-205ENST00000527821 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
SSH3-205ENST00000527821 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
SSH3-205ENST00000527821 HMGXB3Q12766 1538 aa30.55■■■□□ 2.48
SSH3-205ENST00000527821 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
SSH3-205ENST00000527821 WIZO95785 1651 aa30.45■■■□□ 2.46
SSH3-205ENST00000527821 RSF1Q96T23 1441 aaPredicted RBP30.42■■■□□ 2.46
SSH3-205ENST00000527821 TOP2AP11388 1531 aaKnown RBP30.11■■■□□ 2.41
SSH3-205ENST00000527821 NESP48681 1621 aa29.94■■■□□ 2.38
SSH3-205ENST00000527821 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
SSH3-205ENST00000527821 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
SSH3-205ENST00000527821 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
SSH3-205ENST00000527821 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
SSH3-205ENST00000527821 CCDC88BA6NC98 1476 aa29.75■■■□□ 2.35
SSH3-205ENST00000527821 PDS5BQ9NTI5 1447 aa29.68■■■□□ 2.34
SSH3-205ENST00000527821 CFTRP13569 1480 aa29.64■■■□□ 2.34
SSH3-205ENST00000527821 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
SSH3-205ENST00000527821 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
SSH3-205ENST00000527821 PRDM2Q13029 1718 aa29.47■■■□□ 2.31
SSH3-205ENST00000527821 THOC2Q8NI27 1593 aaKnown RBP29.45■■■□□ 2.31
SSH3-205ENST00000527821 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
SSH3-205ENST00000527821 CUX2O14529 1486 aa29.42■■■□□ 2.3
SSH3-205ENST00000527821 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
SSH3-205ENST00000527821 WDR62O43379 1518 aa29.25■■■□□ 2.27
SSH3-205ENST00000527821 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
SSH3-205ENST00000527821 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
SSH3-205ENST00000527821 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
SSH3-205ENST00000527821 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
SSH3-205ENST00000527821 CUX1P39880 1505 aa28.84■■■□□ 2.21
SSH3-205ENST00000527821 IFT140Q96RY7 1462 aa28.8■■■□□ 2.2
SSH3-205ENST00000527821 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
SSH3-205ENST00000527821 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
SSH3-205ENST00000527821 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
SSH3-205ENST00000527821 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
SSH3-205ENST00000527821 SOGA1O94964 1423 aa28.68■■■□□ 2.18
SSH3-205ENST00000527821 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
SSH3-205ENST00000527821 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
SSH3-205ENST00000527821 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
SSH3-205ENST00000527821 TOP2BQ02880 1626 aa28.62■■■□□ 2.17
SSH3-205ENST00000527821 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
SSH3-205ENST00000527821 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
SSH3-205ENST00000527821 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
SSH3-205ENST00000527821 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
SSH3-205ENST00000527821 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
SSH3-205ENST00000527821 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
SSH3-205ENST00000527821 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
SSH3-205ENST00000527821 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
SSH3-205ENST00000527821 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
SSH3-205ENST00000527821 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
SSH3-205ENST00000527821 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
SSH3-205ENST00000527821 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
SSH3-205ENST00000527821 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
SSH3-205ENST00000527821 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
SSH3-205ENST00000527821 FBLN2P98095 1184 aa28.22■■■□□ 2.11
SSH3-205ENST00000527821 CHD1O14646 1710 aa28.21■■■□□ 2.11
SSH3-205ENST00000527821 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
SSH3-205ENST00000527821 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
SSH3-205ENST00000527821 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
SSH3-205ENST00000527821 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
SSH3-205ENST00000527821 KIF27Q86VH2 1401 aa28.09■■■□□ 2.09
SSH3-205ENST00000527821 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
SSH3-205ENST00000527821 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.08
SSH3-205ENST00000527821 GRIN2AQ12879 1464 aa27.95■■■□□ 2.07
SSH3-205ENST00000527821 IGF1RP08069 1367 aa27.95■■■□□ 2.06
SSH3-205ENST00000527821 CUL7Q14999 1698 aa27.9■■■□□ 2.06
SSH3-205ENST00000527821 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
SSH3-205ENST00000527821 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
SSH3-205ENST00000527821 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
SSH3-205ENST00000527821 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
SSH3-205ENST00000527821 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
SSH3-205ENST00000527821 NUP160Q12769 1436 aa27.8■■■□□ 2.04
SSH3-205ENST00000527821 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
SSH3-205ENST00000527821 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
SSH3-205ENST00000527821 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
SSH3-205ENST00000527821 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
SSH3-205ENST00000527821 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
SSH3-205ENST00000527821 EEA1Q15075 1411 aa27.62■■■□□ 2.01
SSH3-205ENST00000527821 CSRNP3Q8WYN3 585 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms