RNA–Protein interactions for RNA: ENST00000527605.5

PAMR1-201, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 5

Gene PAMR1, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-201ENST00000527605 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
PAMR1-201ENST00000527605 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
PAMR1-201ENST00000527605 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
PAMR1-201ENST00000527605 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
PAMR1-201ENST00000527605 ABCC9O60706 1549 aa21.97■■□□□ 1.11
PAMR1-201ENST00000527605 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
PAMR1-201ENST00000527605 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
PAMR1-201ENST00000527605 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
PAMR1-201ENST00000527605 NACADO15069 1562 aa21.3■■□□□ 1
PAMR1-201ENST00000527605 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
PAMR1-201ENST00000527605 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
PAMR1-201ENST00000527605 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
PAMR1-201ENST00000527605 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
PAMR1-201ENST00000527605 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
PAMR1-201ENST00000527605 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
PAMR1-201ENST00000527605 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
PAMR1-201ENST00000527605 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.9
PAMR1-201ENST00000527605 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
PAMR1-201ENST00000527605 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
PAMR1-201ENST00000527605 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
PAMR1-201ENST00000527605 WIZO95785 1651 aa20.37■□□□□ 0.85
PAMR1-201ENST00000527605 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
PAMR1-201ENST00000527605 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
PAMR1-201ENST00000527605 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
PAMR1-201ENST00000527605 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
PAMR1-201ENST00000527605 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
PAMR1-201ENST00000527605 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PAMR1-201ENST00000527605 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
PAMR1-201ENST00000527605 HRCP23327 699 aa19.96■□□□□ 0.79
PAMR1-201ENST00000527605 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
PAMR1-201ENST00000527605 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
PAMR1-201ENST00000527605 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
PAMR1-201ENST00000527605 SMARCA2P51531 1590 aa19.89■□□□□ 0.78
PAMR1-201ENST00000527605 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
PAMR1-201ENST00000527605 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
PAMR1-201ENST00000527605 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
PAMR1-201ENST00000527605 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
PAMR1-201ENST00000527605 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
PAMR1-201ENST00000527605 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
PAMR1-201ENST00000527605 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
PAMR1-201ENST00000527605 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
PAMR1-201ENST00000527605 EEA1Q15075 1411 aa19.48■□□□□ 0.71
PAMR1-201ENST00000527605 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
PAMR1-201ENST00000527605 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
PAMR1-201ENST00000527605 SOGA1O94964 1423 aa19.35■□□□□ 0.69
PAMR1-201ENST00000527605 SYNJ1O43426 1573 aa19.33■□□□□ 0.68
PAMR1-201ENST00000527605 CFTRP13569 1480 aa19.32■□□□□ 0.68
PAMR1-201ENST00000527605 TNIKQ9UKE5 1360 aa19.29■□□□□ 0.68
PAMR1-201ENST00000527605 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
PAMR1-201ENST00000527605 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
PAMR1-201ENST00000527605 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
PAMR1-201ENST00000527605 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
PAMR1-201ENST00000527605 KIF21BO75037 1637 aa19.22■□□□□ 0.67
PAMR1-201ENST00000527605 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
PAMR1-201ENST00000527605 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
PAMR1-201ENST00000527605 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
PAMR1-201ENST00000527605 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
PAMR1-201ENST00000527605 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
PAMR1-201ENST00000527605 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
PAMR1-201ENST00000527605 NESP48681 1621 aa19.16■□□□□ 0.66
PAMR1-201ENST00000527605 CUX1P39880 1505 aa19.13■□□□□ 0.65
PAMR1-201ENST00000527605 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
PAMR1-201ENST00000527605 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
PAMR1-201ENST00000527605 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
PAMR1-201ENST00000527605 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
PAMR1-201ENST00000527605 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
PAMR1-201ENST00000527605 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
PAMR1-201ENST00000527605 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
PAMR1-201ENST00000527605 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
PAMR1-201ENST00000527605 CLIP1P30622 1438 aa18.91■□□□□ 0.62
PAMR1-201ENST00000527605 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
PAMR1-201ENST00000527605 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
PAMR1-201ENST00000527605 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
PAMR1-201ENST00000527605 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
PAMR1-201ENST00000527605 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
PAMR1-201ENST00000527605 CUX2O14529 1486 aa18.85■□□□□ 0.61
PAMR1-201ENST00000527605 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
PAMR1-201ENST00000527605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
PAMR1-201ENST00000527605 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
PAMR1-201ENST00000527605 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
PAMR1-201ENST00000527605 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
PAMR1-201ENST00000527605 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
PAMR1-201ENST00000527605 CCER1Q8TC90 406 aaPredicted RBP18.8■□□□□ 0.6
PAMR1-201ENST00000527605 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
PAMR1-201ENST00000527605 IGF1RP08069 1367 aa18.73■□□□□ 0.59
PAMR1-201ENST00000527605 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
PAMR1-201ENST00000527605 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
PAMR1-201ENST00000527605 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
PAMR1-201ENST00000527605 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
PAMR1-201ENST00000527605 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
PAMR1-201ENST00000527605 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
PAMR1-201ENST00000527605 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
PAMR1-201ENST00000527605 APLP2Q06481 763 aa18.6■□□□□ 0.57
PAMR1-201ENST00000527605 WDR97A6NE52 1622 aa18.58■□□□□ 0.56
PAMR1-201ENST00000527605 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
PAMR1-201ENST00000527605 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
PAMR1-201ENST00000527605 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
PAMR1-201ENST00000527605 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
PAMR1-201ENST00000527605 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
PAMR1-201ENST00000527605 WDR62O43379 1518 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms