RNA–Protein interactions for RNA: ENST00000527141.5

CTSF-205, Transcript of cathepsin F, humanhuman

TSL 2

Gene CTSF, Length 1,856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-205ENST00000527141 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
CTSF-205ENST00000527141 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
CTSF-205ENST00000527141 ABCC9O60706 1549 aa29.42■■■□□ 2.3
CTSF-205ENST00000527141 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
CTSF-205ENST00000527141 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
CTSF-205ENST00000527141 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
CTSF-205ENST00000527141 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
CTSF-205ENST00000527141 NACADO15069 1562 aa28.55■■■□□ 2.16
CTSF-205ENST00000527141 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
CTSF-205ENST00000527141 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
CTSF-205ENST00000527141 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
CTSF-205ENST00000527141 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
CTSF-205ENST00000527141 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
CTSF-205ENST00000527141 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
CTSF-205ENST00000527141 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
CTSF-205ENST00000527141 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
CTSF-205ENST00000527141 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
CTSF-205ENST00000527141 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
CTSF-205ENST00000527141 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
CTSF-205ENST00000527141 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
CTSF-205ENST00000527141 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.85
CTSF-205ENST00000527141 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
CTSF-205ENST00000527141 WIZO95785 1651 aa26.57■■□□□ 1.84
CTSF-205ENST00000527141 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
CTSF-205ENST00000527141 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
CTSF-205ENST00000527141 PEG3Q9GZU2 1588 aa26.52■■□□□ 1.84
CTSF-205ENST00000527141 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
CTSF-205ENST00000527141 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
CTSF-205ENST00000527141 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
CTSF-205ENST00000527141 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
CTSF-205ENST00000527141 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
CTSF-205ENST00000527141 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
CTSF-205ENST00000527141 NESP48681 1621 aa25.7■■□□□ 1.7
CTSF-205ENST00000527141 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
CTSF-205ENST00000527141 CFTRP13569 1480 aa25.65■■□□□ 1.7
CTSF-205ENST00000527141 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
CTSF-205ENST00000527141 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
CTSF-205ENST00000527141 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
CTSF-205ENST00000527141 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
CTSF-205ENST00000527141 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
CTSF-205ENST00000527141 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
CTSF-205ENST00000527141 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
CTSF-205ENST00000527141 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
CTSF-205ENST00000527141 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
CTSF-205ENST00000527141 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
CTSF-205ENST00000527141 CUX1P39880 1505 aa25.12■■□□□ 1.61
CTSF-205ENST00000527141 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
CTSF-205ENST00000527141 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
CTSF-205ENST00000527141 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
CTSF-205ENST00000527141 THOC2Q8NI27 1593 aaKnown RBP25.08■■□□□ 1.61
CTSF-205ENST00000527141 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
CTSF-205ENST00000527141 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
CTSF-205ENST00000527141 WDR62O43379 1518 aa25■■□□□ 1.59
CTSF-205ENST00000527141 TOP2BQ02880 1626 aa25■■□□□ 1.59
CTSF-205ENST00000527141 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
CTSF-205ENST00000527141 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
CTSF-205ENST00000527141 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
CTSF-205ENST00000527141 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
CTSF-205ENST00000527141 CUX2O14529 1486 aa24.86■■□□□ 1.57
CTSF-205ENST00000527141 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
CTSF-205ENST00000527141 SOGA1O94964 1423 aa24.77■■□□□ 1.56
CTSF-205ENST00000527141 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
CTSF-205ENST00000527141 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
CTSF-205ENST00000527141 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
CTSF-205ENST00000527141 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
CTSF-205ENST00000527141 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
CTSF-205ENST00000527141 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
CTSF-205ENST00000527141 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
CTSF-205ENST00000527141 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.52
CTSF-205ENST00000527141 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
CTSF-205ENST00000527141 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
CTSF-205ENST00000527141 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
CTSF-205ENST00000527141 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
CTSF-205ENST00000527141 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
CTSF-205ENST00000527141 IGF1RP08069 1367 aa24.45■■□□□ 1.51
CTSF-205ENST00000527141 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
CTSF-205ENST00000527141 EEA1Q15075 1411 aa24.38■■□□□ 1.49
CTSF-205ENST00000527141 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
CTSF-205ENST00000527141 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
CTSF-205ENST00000527141 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
CTSF-205ENST00000527141 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
CTSF-205ENST00000527141 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
CTSF-205ENST00000527141 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
CTSF-205ENST00000527141 ADAMTS12P58397 1594 aa24.23■■□□□ 1.47
CTSF-205ENST00000527141 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
CTSF-205ENST00000527141 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.47
CTSF-205ENST00000527141 CUL7Q14999 1698 aa24.2■■□□□ 1.46
CTSF-205ENST00000527141 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
CTSF-205ENST00000527141 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
CTSF-205ENST00000527141 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
CTSF-205ENST00000527141 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
CTSF-205ENST00000527141 KIF21BO75037 1637 aa24.14■■□□□ 1.46
CTSF-205ENST00000527141 FBLN2P98095 1184 aa24.1■■□□□ 1.45
CTSF-205ENST00000527141 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
CTSF-205ENST00000527141 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
CTSF-205ENST00000527141 CHD1O14646 1710 aa24.06■■□□□ 1.44
CTSF-205ENST00000527141 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
CTSF-205ENST00000527141 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
CTSF-205ENST00000527141 NUP160Q12769 1436 aa23.98■■□□□ 1.43
CTSF-205ENST00000527141 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms