RNA–Protein interactions for RNA: ENST00000527029.1

ALKBH3-203, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-203ENST00000527029 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
ALKBH3-203ENST00000527029 ABCC9O60706 1549 aa35.66■■■■□ 3.3
ALKBH3-203ENST00000527029 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
ALKBH3-203ENST00000527029 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
ALKBH3-203ENST00000527029 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
ALKBH3-203ENST00000527029 NACADO15069 1562 aa33.2■■■□□ 2.91
ALKBH3-203ENST00000527029 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
ALKBH3-203ENST00000527029 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
ALKBH3-203ENST00000527029 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
ALKBH3-203ENST00000527029 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
ALKBH3-203ENST00000527029 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
ALKBH3-203ENST00000527029 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
ALKBH3-203ENST00000527029 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
ALKBH3-203ENST00000527029 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
ALKBH3-203ENST00000527029 EIF4G1Q04637 1599 aaKnown RBP31.92■■■□□ 2.7
ALKBH3-203ENST00000527029 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
ALKBH3-203ENST00000527029 DCAF1Q9Y4B6 1507 aa31.84■■■□□ 2.69
ALKBH3-203ENST00000527029 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
ALKBH3-203ENST00000527029 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
ALKBH3-203ENST00000527029 CUX2O14529 1486 aa30.99■■■□□ 2.55
ALKBH3-203ENST00000527029 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
ALKBH3-203ENST00000527029 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
ALKBH3-203ENST00000527029 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
ALKBH3-203ENST00000527029 NESP48681 1621 aa30.45■■■□□ 2.47
ALKBH3-203ENST00000527029 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
ALKBH3-203ENST00000527029 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
ALKBH3-203ENST00000527029 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
ALKBH3-203ENST00000527029 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
ALKBH3-203ENST00000527029 BAZ1BQ9UIG0 1483 aaKnown RBP30.14■■■□□ 2.42
ALKBH3-203ENST00000527029 TRIM41Q8WV44 630 aa30.13■■■□□ 2.41
ALKBH3-203ENST00000527029 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
ALKBH3-203ENST00000527029 BAZ1AQ9NRL2 1556 aaPredicted RBP30.01■■■□□ 2.39
ALKBH3-203ENST00000527029 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.39
ALKBH3-203ENST00000527029 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
ALKBH3-203ENST00000527029 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
ALKBH3-203ENST00000527029 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
ALKBH3-203ENST00000527029 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
ALKBH3-203ENST00000527029 CADPSQ9ULU8 1353 aa29.72■■■□□ 2.35
ALKBH3-203ENST00000527029 WDR62O43379 1518 aa29.67■■■□□ 2.34
ALKBH3-203ENST00000527029 OSCARQ8IYS5 282 aa29.49■■■□□ 2.31
ALKBH3-203ENST00000527029 CEP164Q9UPV0 1460 aa29.46■■■□□ 2.31
ALKBH3-203ENST00000527029 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
ALKBH3-203ENST00000527029 WIZO95785 1651 aa29.37■■■□□ 2.29
ALKBH3-203ENST00000527029 CFTRP13569 1480 aa29.23■■■□□ 2.27
ALKBH3-203ENST00000527029 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.27
ALKBH3-203ENST00000527029 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
ALKBH3-203ENST00000527029 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
ALKBH3-203ENST00000527029 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
ALKBH3-203ENST00000527029 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
ALKBH3-203ENST00000527029 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
ALKBH3-203ENST00000527029 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
ALKBH3-203ENST00000527029 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
ALKBH3-203ENST00000527029 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
ALKBH3-203ENST00000527029 CYB5RLQ6IPT4 315 aa28.87■■■□□ 2.21
ALKBH3-203ENST00000527029 PRDM2Q13029 1718 aa28.84■■■□□ 2.21
ALKBH3-203ENST00000527029 TRHP20396 242 aaPredicted RBP28.76■■■□□ 2.19
ALKBH3-203ENST00000527029 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
ALKBH3-203ENST00000527029 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
ALKBH3-203ENST00000527029 ARAP1Q96P48 1450 aa28.69■■■□□ 2.18
ALKBH3-203ENST00000527029 CHD1O14646 1710 aa28.66■■■□□ 2.18
ALKBH3-203ENST00000527029 CCDC88BA6NC98 1476 aa28.65■■■□□ 2.18
ALKBH3-203ENST00000527029 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
ALKBH3-203ENST00000527029 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
ALKBH3-203ENST00000527029 FBLN2P98095 1184 aa28.56■■■□□ 2.16
ALKBH3-203ENST00000527029 DNMBPQ6XZF7 1577 aa28.56■■■□□ 2.16
ALKBH3-203ENST00000527029 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
ALKBH3-203ENST00000527029 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
ALKBH3-203ENST00000527029 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
ALKBH3-203ENST00000527029 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
ALKBH3-203ENST00000527029 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
ALKBH3-203ENST00000527029 CLASP1Q7Z460 1538 aa28.31■■■□□ 2.12
ALKBH3-203ENST00000527029 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
ALKBH3-203ENST00000527029 SOGA1O94964 1423 aa28.27■■■□□ 2.12
ALKBH3-203ENST00000527029 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
ALKBH3-203ENST00000527029 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
ALKBH3-203ENST00000527029 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
ALKBH3-203ENST00000527029 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
ALKBH3-203ENST00000527029 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
ALKBH3-203ENST00000527029 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
ALKBH3-203ENST00000527029 SYNJ2O15056 1496 aa28.08■■■□□ 2.09
ALKBH3-203ENST00000527029 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
ALKBH3-203ENST00000527029 CUX1P39880 1505 aa28.01■■■□□ 2.07
ALKBH3-203ENST00000527029 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
ALKBH3-203ENST00000527029 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
ALKBH3-203ENST00000527029 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
ALKBH3-203ENST00000527029 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
ALKBH3-203ENST00000527029 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
ALKBH3-203ENST00000527029 CEP170Q5SW79 1584 aa27.72■■■□□ 2.03
ALKBH3-203ENST00000527029 NUP160Q12769 1436 aa27.67■■■□□ 2.02
ALKBH3-203ENST00000527029 KIF13AQ9H1H9 1805 aa27.65■■■□□ 2.02
ALKBH3-203ENST00000527029 ADAMTS12P58397 1594 aa27.62■■■□□ 2.01
ALKBH3-203ENST00000527029 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
ALKBH3-203ENST00000527029 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
ALKBH3-203ENST00000527029 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
ALKBH3-203ENST00000527029 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
ALKBH3-203ENST00000527029 FAM69CQ0P6D2 419 aa27.45■■□□□ 1.98
ALKBH3-203ENST00000527029 ABCC10Q5T3U5 1492 aa27.42■■□□□ 1.98
ALKBH3-203ENST00000527029 JPH4Q96JJ6 628 aa27.41■■□□□ 1.98
ALKBH3-203ENST00000527029 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
ALKBH3-203ENST00000527029 KDM4FA0A1W2PPD8 638 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms