RNA–Protein interactions for RNA: ENST00000526881.1

TRIM29-209, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-209ENST00000526881 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
TRIM29-209ENST00000526881 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
TRIM29-209ENST00000526881 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
TRIM29-209ENST00000526881 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
TRIM29-209ENST00000526881 ABCC9O60706 1549 aa16.12■□□□□ 0.17
TRIM29-209ENST00000526881 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
TRIM29-209ENST00000526881 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
TRIM29-209ENST00000526881 NACADO15069 1562 aa15.22■□□□□ 0.03
TRIM29-209ENST00000526881 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
TRIM29-209ENST00000526881 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
TRIM29-209ENST00000526881 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
TRIM29-209ENST00000526881 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
TRIM29-209ENST00000526881 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
TRIM29-209ENST00000526881 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
TRIM29-209ENST00000526881 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM29-209ENST00000526881 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
TRIM29-209ENST00000526881 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
TRIM29-209ENST00000526881 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
TRIM29-209ENST00000526881 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
TRIM29-209ENST00000526881 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
TRIM29-209ENST00000526881 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
TRIM29-209ENST00000526881 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
TRIM29-209ENST00000526881 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
TRIM29-209ENST00000526881 FOXD1Q16676 465 aa14.22□□□□□ -0.13
TRIM29-209ENST00000526881 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
TRIM29-209ENST00000526881 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
TRIM29-209ENST00000526881 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
TRIM29-209ENST00000526881 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.16
TRIM29-209ENST00000526881 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
TRIM29-209ENST00000526881 HMGXB3Q12766 1538 aa14□□□□□ -0.17
TRIM29-209ENST00000526881 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
TRIM29-209ENST00000526881 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
TRIM29-209ENST00000526881 NESP48681 1621 aa13.93□□□□□ -0.18
TRIM29-209ENST00000526881 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
TRIM29-209ENST00000526881 WIZO95785 1651 aa13.85□□□□□ -0.19
TRIM29-209ENST00000526881 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
TRIM29-209ENST00000526881 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
TRIM29-209ENST00000526881 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
TRIM29-209ENST00000526881 CUX2O14529 1486 aa13.75□□□□□ -0.21
TRIM29-209ENST00000526881 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
TRIM29-209ENST00000526881 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
TRIM29-209ENST00000526881 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
TRIM29-209ENST00000526881 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
TRIM29-209ENST00000526881 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
TRIM29-209ENST00000526881 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
TRIM29-209ENST00000526881 KCNA4P22459 653 aa13.6□□□□□ -0.23
TRIM29-209ENST00000526881 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
TRIM29-209ENST00000526881 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
TRIM29-209ENST00000526881 ADRA2BP18089 450 aa13.55□□□□□ -0.24
TRIM29-209ENST00000526881 CFTRP13569 1480 aa13.55□□□□□ -0.24
TRIM29-209ENST00000526881 WDR62O43379 1518 aa13.54□□□□□ -0.24
TRIM29-209ENST00000526881 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
TRIM29-209ENST00000526881 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
TRIM29-209ENST00000526881 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
TRIM29-209ENST00000526881 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
TRIM29-209ENST00000526881 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
TRIM29-209ENST00000526881 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
TRIM29-209ENST00000526881 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
TRIM29-209ENST00000526881 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
TRIM29-209ENST00000526881 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
TRIM29-209ENST00000526881 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
TRIM29-209ENST00000526881 MSH5O43196 834 aa13.22□□□□□ -0.29
TRIM29-209ENST00000526881 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
TRIM29-209ENST00000526881 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
TRIM29-209ENST00000526881 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.3
TRIM29-209ENST00000526881 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
TRIM29-209ENST00000526881 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
TRIM29-209ENST00000526881 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
TRIM29-209ENST00000526881 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
TRIM29-209ENST00000526881 CUX1P39880 1505 aa13.15□□□□□ -0.3
TRIM29-209ENST00000526881 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM29-209ENST00000526881 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
TRIM29-209ENST00000526881 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
TRIM29-209ENST00000526881 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
TRIM29-209ENST00000526881 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
TRIM29-209ENST00000526881 CHD1O14646 1710 aa13.08□□□□□ -0.32
TRIM29-209ENST00000526881 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
TRIM29-209ENST00000526881 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
TRIM29-209ENST00000526881 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
TRIM29-209ENST00000526881 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
TRIM29-209ENST00000526881 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
TRIM29-209ENST00000526881 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
TRIM29-209ENST00000526881 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
TRIM29-209ENST00000526881 SOGA1O94964 1423 aa13.05□□□□□ -0.32
TRIM29-209ENST00000526881 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
TRIM29-209ENST00000526881 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
TRIM29-209ENST00000526881 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
TRIM29-209ENST00000526881 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.33
TRIM29-209ENST00000526881 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
TRIM29-209ENST00000526881 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
TRIM29-209ENST00000526881 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
TRIM29-209ENST00000526881 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
TRIM29-209ENST00000526881 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
TRIM29-209ENST00000526881 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
TRIM29-209ENST00000526881 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
TRIM29-209ENST00000526881 FBLN2P98095 1184 aa12.91□□□□□ -0.34
TRIM29-209ENST00000526881 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
TRIM29-209ENST00000526881 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
TRIM29-209ENST00000526881 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
TRIM29-209ENST00000526881 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms