RNA–Protein interactions for RNA: ENST00000526836.1

PDZD3-205, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-205ENST00000526836 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
PDZD3-205ENST00000526836 CCDC180Q9P1Z9 1646 aa24.05■■□□□ 1.44
PDZD3-205ENST00000526836 ABCC9O60706 1549 aa23.79■■□□□ 1.4
PDZD3-205ENST00000526836 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
PDZD3-205ENST00000526836 NACADO15069 1562 aa22.75■■□□□ 1.23
PDZD3-205ENST00000526836 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
PDZD3-205ENST00000526836 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
PDZD3-205ENST00000526836 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
PDZD3-205ENST00000526836 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
PDZD3-205ENST00000526836 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDZD3-205ENST00000526836 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
PDZD3-205ENST00000526836 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
PDZD3-205ENST00000526836 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
PDZD3-205ENST00000526836 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
PDZD3-205ENST00000526836 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
PDZD3-205ENST00000526836 EIF4G1Q04637 1599 aaKnown RBP21.49■■□□□ 1.03
PDZD3-205ENST00000526836 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
PDZD3-205ENST00000526836 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
PDZD3-205ENST00000526836 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
PDZD3-205ENST00000526836 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
PDZD3-205ENST00000526836 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
PDZD3-205ENST00000526836 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
PDZD3-205ENST00000526836 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
PDZD3-205ENST00000526836 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
PDZD3-205ENST00000526836 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
PDZD3-205ENST00000526836 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
PDZD3-205ENST00000526836 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
PDZD3-205ENST00000526836 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
PDZD3-205ENST00000526836 WIZO95785 1651 aa20.8■□□□□ 0.92
PDZD3-205ENST00000526836 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
PDZD3-205ENST00000526836 NESP48681 1621 aa20.6■□□□□ 0.89
PDZD3-205ENST00000526836 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
PDZD3-205ENST00000526836 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
PDZD3-205ENST00000526836 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
PDZD3-205ENST00000526836 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
PDZD3-205ENST00000526836 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
PDZD3-205ENST00000526836 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
PDZD3-205ENST00000526836 CFTRP13569 1480 aa20.37■□□□□ 0.85
PDZD3-205ENST00000526836 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
PDZD3-205ENST00000526836 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
PDZD3-205ENST00000526836 CUX2O14529 1486 aa20.15■□□□□ 0.82
PDZD3-205ENST00000526836 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
PDZD3-205ENST00000526836 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
PDZD3-205ENST00000526836 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
PDZD3-205ENST00000526836 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
PDZD3-205ENST00000526836 WDR62O43379 1518 aa19.99■□□□□ 0.79
PDZD3-205ENST00000526836 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
PDZD3-205ENST00000526836 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
PDZD3-205ENST00000526836 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
PDZD3-205ENST00000526836 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
PDZD3-205ENST00000526836 SOGA1O94964 1423 aa19.76■□□□□ 0.75
PDZD3-205ENST00000526836 CUX1P39880 1505 aa19.76■□□□□ 0.75
PDZD3-205ENST00000526836 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
PDZD3-205ENST00000526836 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
PDZD3-205ENST00000526836 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
PDZD3-205ENST00000526836 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
PDZD3-205ENST00000526836 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
PDZD3-205ENST00000526836 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
PDZD3-205ENST00000526836 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
PDZD3-205ENST00000526836 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
PDZD3-205ENST00000526836 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDZD3-205ENST00000526836 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
PDZD3-205ENST00000526836 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
PDZD3-205ENST00000526836 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
PDZD3-205ENST00000526836 FBLN2P98095 1184 aa19.54■□□□□ 0.72
PDZD3-205ENST00000526836 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
PDZD3-205ENST00000526836 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
PDZD3-205ENST00000526836 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
PDZD3-205ENST00000526836 EIF4G3O43432 1585 aaKnown RBP19.46■□□□□ 0.71
PDZD3-205ENST00000526836 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
PDZD3-205ENST00000526836 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
PDZD3-205ENST00000526836 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
PDZD3-205ENST00000526836 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
PDZD3-205ENST00000526836 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
PDZD3-205ENST00000526836 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
PDZD3-205ENST00000526836 IGF1RP08069 1367 aa19.32■□□□□ 0.68
PDZD3-205ENST00000526836 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
PDZD3-205ENST00000526836 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
PDZD3-205ENST00000526836 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
PDZD3-205ENST00000526836 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
PDZD3-205ENST00000526836 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
PDZD3-205ENST00000526836 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
PDZD3-205ENST00000526836 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
PDZD3-205ENST00000526836 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
PDZD3-205ENST00000526836 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
PDZD3-205ENST00000526836 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
PDZD3-205ENST00000526836 CHD1O14646 1710 aa19.17■□□□□ 0.66
PDZD3-205ENST00000526836 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
PDZD3-205ENST00000526836 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
PDZD3-205ENST00000526836 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
PDZD3-205ENST00000526836 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
PDZD3-205ENST00000526836 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
PDZD3-205ENST00000526836 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
PDZD3-205ENST00000526836 NUP160Q12769 1436 aa19.08■□□□□ 0.65
PDZD3-205ENST00000526836 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
PDZD3-205ENST00000526836 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
PDZD3-205ENST00000526836 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
PDZD3-205ENST00000526836 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
PDZD3-205ENST00000526836 RIMBP3CA6NJZ7 1639 aa18.98■□□□□ 0.63
PDZD3-205ENST00000526836 RIMBP3BA6NNM3 1639 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms