RNA–Protein interactions for RNA: ENST00000526738.1

RELA-209, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-209ENST00000526738 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
RELA-209ENST00000526738 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.89
RELA-209ENST00000526738 AEBP2Q6ZN18 517 aaPredicted RBP38.79■■■■□ 3.8
RELA-209ENST00000526738 CHIC1Q5VXU3 224 aa38.28■■■■□ 3.72
RELA-209ENST00000526738 ABCC9O60706 1549 aa38.03■■■■□ 3.68
RELA-209ENST00000526738 ZCCHC6Q5VYS8 1495 aaKnown RBP37.12■■■■□ 3.53
RELA-209ENST00000526738 NACADO15069 1562 aa36.91■■■■□ 3.5
RELA-209ENST00000526738 MYO15BQ96JP2 1530 aa36.89■■■■□ 3.5
RELA-209ENST00000526738 DCAF1Q9Y4B6 1507 aa36.86■■■■□ 3.49
RELA-209ENST00000526738 DCAF8L2P0C7V8 631 aa36.86■■■■□ 3.49
RELA-209ENST00000526738 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
RELA-209ENST00000526738 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
RELA-209ENST00000526738 SCRIBQ14160 1630 aa35.84■■■■□ 3.33
RELA-209ENST00000526738 BICRAQ9NZM4 1560 aa35.67■■■■□ 3.3
RELA-209ENST00000526738 PABPN1Q86U42 306 aaKnown RBP eCLIP35.59■■■■□ 3.29
RELA-209ENST00000526738 SHROOM4Q9ULL8 1493 aa35.47■■■■□ 3.27
RELA-209ENST00000526738 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.15
RELA-209ENST00000526738 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
RELA-209ENST00000526738 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
RELA-209ENST00000526738 BAZ1AQ9NRL2 1556 aaPredicted RBP34.44■■■■□ 3.1
RELA-209ENST00000526738 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
RELA-209ENST00000526738 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
RELA-209ENST00000526738 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
RELA-209ENST00000526738 ATAD2BQ9ULI0 1458 aa34.11■■■■□ 3.05
RELA-209ENST00000526738 SMARCA2P51531 1590 aa34.1■■■■□ 3.05
RELA-209ENST00000526738 PEG3Q9GZU2 1588 aa34.09■■■■□ 3.05
RELA-209ENST00000526738 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
RELA-209ENST00000526738 RSF1Q96T23 1441 aaPredicted RBP34.02■■■■□ 3.04
RELA-209ENST00000526738 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
RELA-209ENST00000526738 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
RELA-209ENST00000526738 WIZO95785 1651 aa33.82■■■■□ 3
RELA-209ENST00000526738 PHF23Q9BUL5 403 aaPredicted RBP33.72■■■□□ 2.99
RELA-209ENST00000526738 TOP2AP11388 1531 aaKnown RBP33.58■■■□□ 2.97
RELA-209ENST00000526738 SUPT5HO00267 1087 aaKnown RBP33.37■■■□□ 2.93
RELA-209ENST00000526738 CCDC88BA6NC98 1476 aa33.16■■■□□ 2.9
RELA-209ENST00000526738 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
RELA-209ENST00000526738 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.88
RELA-209ENST00000526738 NESP48681 1621 aa33.02■■■□□ 2.88
RELA-209ENST00000526738 CFTRP13569 1480 aa32.98■■■□□ 2.87
RELA-209ENST00000526738 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
RELA-209ENST00000526738 SENP3Q9H4L4 574 aaPredicted RBP32.83■■■□□ 2.85
RELA-209ENST00000526738 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
RELA-209ENST00000526738 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
RELA-209ENST00000526738 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
RELA-209ENST00000526738 KIF21AQ7Z4S6 1674 aa32.6■■■□□ 2.81
RELA-209ENST00000526738 CEP164Q9UPV0 1460 aa32.6■■■□□ 2.81
RELA-209ENST00000526738 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
RELA-209ENST00000526738 THOC2Q8NI27 1593 aaKnown RBP32.46■■■□□ 2.79
RELA-209ENST00000526738 WDR62O43379 1518 aa32.36■■■□□ 2.77
RELA-209ENST00000526738 CUX2O14529 1486 aa32.34■■■□□ 2.77
RELA-209ENST00000526738 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
RELA-209ENST00000526738 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
RELA-209ENST00000526738 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
RELA-209ENST00000526738 TOPBP1Q92547 1522 aa32.19■■■□□ 2.74
RELA-209ENST00000526738 CUX1P39880 1505 aa32.08■■■□□ 2.73
RELA-209ENST00000526738 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.72
RELA-209ENST00000526738 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
RELA-209ENST00000526738 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
RELA-209ENST00000526738 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
RELA-209ENST00000526738 FGD5Q6ZNL6 1462 aa31.91■■■□□ 2.7
RELA-209ENST00000526738 SYNJ1O43426 1573 aa31.91■■■□□ 2.7
RELA-209ENST00000526738 BIVM-ERCC5R4GMW8 1640 aa31.91■■■□□ 2.7
RELA-209ENST00000526738 SOGA1O94964 1423 aa31.83■■■□□ 2.69
RELA-209ENST00000526738 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
RELA-209ENST00000526738 RAD54L2Q9Y4B4 1467 aa31.77■■■□□ 2.68
RELA-209ENST00000526738 ZNF608Q9ULD9 1512 aaPredicted RBP31.68■■■□□ 2.66
RELA-209ENST00000526738 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
RELA-209ENST00000526738 WDR97A6NE52 1622 aa31.64■■■□□ 2.66
RELA-209ENST00000526738 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
RELA-209ENST00000526738 EIF4G3O43432 1585 aaKnown RBP31.57■■■□□ 2.64
RELA-209ENST00000526738 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
RELA-209ENST00000526738 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.641e-6■■□□□ 12.4
RELA-209ENST00000526738 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
RELA-209ENST00000526738 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
RELA-209ENST00000526738 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
RELA-209ENST00000526738 KIF27Q86VH2 1401 aa31.37■■■□□ 2.61
RELA-209ENST00000526738 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
RELA-209ENST00000526738 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
RELA-209ENST00000526738 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
RELA-209ENST00000526738 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
RELA-209ENST00000526738 PLPPR3Q6T4P5 718 aa31.24■■■□□ 2.59
RELA-209ENST00000526738 IGF1RP08069 1367 aa31.19■■■□□ 2.58
RELA-209ENST00000526738 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
RELA-209ENST00000526738 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
RELA-209ENST00000526738 ADAMTS12P58397 1594 aa31.13■■■□□ 2.57
RELA-209ENST00000526738 RUSC2Q8N2Y8 1516 aa31.13■■■□□ 2.57
RELA-209ENST00000526738 CHMP7Q8WUX9 453 aaPredicted RBP31.1■■■□□ 2.57
RELA-209ENST00000526738 EEA1Q15075 1411 aa31.09■■■□□ 2.57
RELA-209ENST00000526738 FBLN2P98095 1184 aa31.07■■■□□ 2.56
RELA-209ENST00000526738 CUL7Q14999 1698 aa31.06■■■□□ 2.56
RELA-209ENST00000526738 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
RELA-209ENST00000526738 CHD1O14646 1710 aa31.04■■■□□ 2.56
RELA-209ENST00000526738 GRIN2AQ12879 1464 aa31.01■■■□□ 2.56
RELA-209ENST00000526738 CARMIL1Q5VZK9 1371 aa31.01■■■□□ 2.55
RELA-209ENST00000526738 CSRNP3Q8WYN3 585 aa30.93■■■□□ 2.54
RELA-209ENST00000526738 NUP160Q12769 1436 aa30.89■■■□□ 2.53
RELA-209ENST00000526738 PRXQ9BXM0 1461 aa30.88■■■□□ 2.53
RELA-209ENST00000526738 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
RELA-209ENST00000526738 DNAJC5Q9H3Z4 198 aa30.85■■■□□ 2.53
RELA-209ENST00000526738 FAM9AQ8IZU1 332 aaPredicted RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms