RNA–Protein interactions for RNA: ENST00000526520.5

NPIPA3-201, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-201ENST00000526520 NISCHQ9Y2I1 1504 aa21.41■■□□□ 1.02
NPIPA3-201ENST00000526520 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
NPIPA3-201ENST00000526520 ZCCHC6Q5VYS8 1495 aaKnown RBP18.03■□□□□ 0.48
NPIPA3-201ENST00000526520 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
NPIPA3-201ENST00000526520 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
NPIPA3-201ENST00000526520 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
NPIPA3-201ENST00000526520 NACADO15069 1562 aa17.37■□□□□ 0.37
NPIPA3-201ENST00000526520 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
NPIPA3-201ENST00000526520 ABCC9O60706 1549 aa17.31■□□□□ 0.36
NPIPA3-201ENST00000526520 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
NPIPA3-201ENST00000526520 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
NPIPA3-201ENST00000526520 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
NPIPA3-201ENST00000526520 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
NPIPA3-201ENST00000526520 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
NPIPA3-201ENST00000526520 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
NPIPA3-201ENST00000526520 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
NPIPA3-201ENST00000526520 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
NPIPA3-201ENST00000526520 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
NPIPA3-201ENST00000526520 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
NPIPA3-201ENST00000526520 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
NPIPA3-201ENST00000526520 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
NPIPA3-201ENST00000526520 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
NPIPA3-201ENST00000526520 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
NPIPA3-201ENST00000526520 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.2
NPIPA3-201ENST00000526520 WIZO95785 1651 aa16.27■□□□□ 0.19
NPIPA3-201ENST00000526520 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
NPIPA3-201ENST00000526520 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
NPIPA3-201ENST00000526520 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
NPIPA3-201ENST00000526520 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
NPIPA3-201ENST00000526520 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
NPIPA3-201ENST00000526520 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
NPIPA3-201ENST00000526520 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
NPIPA3-201ENST00000526520 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
NPIPA3-201ENST00000526520 EEA1Q15075 1411 aa15.73■□□□□ 0.11
NPIPA3-201ENST00000526520 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
NPIPA3-201ENST00000526520 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
NPIPA3-201ENST00000526520 CFTRP13569 1480 aa15.67■□□□□ 0.1
NPIPA3-201ENST00000526520 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
NPIPA3-201ENST00000526520 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
NPIPA3-201ENST00000526520 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
NPIPA3-201ENST00000526520 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
NPIPA3-201ENST00000526520 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
NPIPA3-201ENST00000526520 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
NPIPA3-201ENST00000526520 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
NPIPA3-201ENST00000526520 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
NPIPA3-201ENST00000526520 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
NPIPA3-201ENST00000526520 LAMC3Q9Y6N6 1575 aa15.44■□□□□ 0.06
NPIPA3-201ENST00000526520 SOGA1O94964 1423 aa15.43■□□□□ 0.06
NPIPA3-201ENST00000526520 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
NPIPA3-201ENST00000526520 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
NPIPA3-201ENST00000526520 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
NPIPA3-201ENST00000526520 CUX1P39880 1505 aa15.38■□□□□ 0.05
NPIPA3-201ENST00000526520 KIF21BO75037 1637 aa15.37■□□□□ 0.05
NPIPA3-201ENST00000526520 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
NPIPA3-201ENST00000526520 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
NPIPA3-201ENST00000526520 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
NPIPA3-201ENST00000526520 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
NPIPA3-201ENST00000526520 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
NPIPA3-201ENST00000526520 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
NPIPA3-201ENST00000526520 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
NPIPA3-201ENST00000526520 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
NPIPA3-201ENST00000526520 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
NPIPA3-201ENST00000526520 PRXQ9BXM0 1461 aa15.23■□□□□ 0.03
NPIPA3-201ENST00000526520 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
NPIPA3-201ENST00000526520 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
NPIPA3-201ENST00000526520 NESP48681 1621 aa15.2■□□□□ 0.02
NPIPA3-201ENST00000526520 CUX2O14529 1486 aa15.18■□□□□ 0.02
NPIPA3-201ENST00000526520 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
NPIPA3-201ENST00000526520 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
NPIPA3-201ENST00000526520 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
NPIPA3-201ENST00000526520 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
NPIPA3-201ENST00000526520 IGF1RP08069 1367 aa15.11■□□□□ 0.01
NPIPA3-201ENST00000526520 CLIP1P30622 1438 aa15.11■□□□□ 0.01
NPIPA3-201ENST00000526520 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
NPIPA3-201ENST00000526520 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
NPIPA3-201ENST00000526520 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
NPIPA3-201ENST00000526520 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
NPIPA3-201ENST00000526520 CUL7Q14999 1698 aa15.05■□□□□ -0
NPIPA3-201ENST00000526520 WDR97A6NE52 1622 aa15.03■□□□□ -0
NPIPA3-201ENST00000526520 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
NPIPA3-201ENST00000526520 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
NPIPA3-201ENST00000526520 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
NPIPA3-201ENST00000526520 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
NPIPA3-201ENST00000526520 WDR62O43379 1518 aa14.98□□□□□ -0.01
NPIPA3-201ENST00000526520 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
NPIPA3-201ENST00000526520 IFT140Q96RY7 1462 aa14.97□□□□□ -0.01
NPIPA3-201ENST00000526520 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
NPIPA3-201ENST00000526520 APLP2Q06481 763 aa14.97□□□□□ -0.01
NPIPA3-201ENST00000526520 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
NPIPA3-201ENST00000526520 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
NPIPA3-201ENST00000526520 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
NPIPA3-201ENST00000526520 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
NPIPA3-201ENST00000526520 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
NPIPA3-201ENST00000526520 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
NPIPA3-201ENST00000526520 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
NPIPA3-201ENST00000526520 HRCP23327 699 aa14.86□□□□□ -0.03
NPIPA3-201ENST00000526520 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
NPIPA3-201ENST00000526520 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
NPIPA3-201ENST00000526520 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
NPIPA3-201ENST00000526520 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms