RNA–Protein interactions for RNA: ENST00000526424.5

C11orf49-209, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-209ENST00000526424 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
C11orf49-209ENST00000526424 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
C11orf49-209ENST00000526424 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
C11orf49-209ENST00000526424 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
C11orf49-209ENST00000526424 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
C11orf49-209ENST00000526424 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
C11orf49-209ENST00000526424 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
C11orf49-209ENST00000526424 ABCC9O60706 1549 aa21.61■■□□□ 1.05
C11orf49-209ENST00000526424 FOXD1Q16676 465 aa21.58■■□□□ 1.05
C11orf49-209ENST00000526424 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
C11orf49-209ENST00000526424 NACADO15069 1562 aa20.89■□□□□ 0.94
C11orf49-209ENST00000526424 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
C11orf49-209ENST00000526424 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
C11orf49-209ENST00000526424 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
C11orf49-209ENST00000526424 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
C11orf49-209ENST00000526424 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
C11orf49-209ENST00000526424 ADRA2BP18089 450 aa20.67■□□□□ 0.9
C11orf49-209ENST00000526424 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
C11orf49-209ENST00000526424 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
C11orf49-209ENST00000526424 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
C11orf49-209ENST00000526424 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
C11orf49-209ENST00000526424 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
C11orf49-209ENST00000526424 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
C11orf49-209ENST00000526424 MSH5O43196 834 aa19.98■□□□□ 0.79
C11orf49-209ENST00000526424 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
C11orf49-209ENST00000526424 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
C11orf49-209ENST00000526424 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
C11orf49-209ENST00000526424 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
C11orf49-209ENST00000526424 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
C11orf49-209ENST00000526424 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
C11orf49-209ENST00000526424 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
C11orf49-209ENST00000526424 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
C11orf49-209ENST00000526424 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
C11orf49-209ENST00000526424 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
C11orf49-209ENST00000526424 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
C11orf49-209ENST00000526424 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
C11orf49-209ENST00000526424 WIZO95785 1651 aa19.11■□□□□ 0.65
C11orf49-209ENST00000526424 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
C11orf49-209ENST00000526424 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
C11orf49-209ENST00000526424 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
C11orf49-209ENST00000526424 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
C11orf49-209ENST00000526424 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
C11orf49-209ENST00000526424 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
C11orf49-209ENST00000526424 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
C11orf49-209ENST00000526424 NESP48681 1621 aa18.74■□□□□ 0.59
C11orf49-209ENST00000526424 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
C11orf49-209ENST00000526424 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
C11orf49-209ENST00000526424 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
C11orf49-209ENST00000526424 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
C11orf49-209ENST00000526424 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
C11orf49-209ENST00000526424 CFTRP13569 1480 aa18.6■□□□□ 0.57
C11orf49-209ENST00000526424 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
C11orf49-209ENST00000526424 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
C11orf49-209ENST00000526424 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
C11orf49-209ENST00000526424 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
C11orf49-209ENST00000526424 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
C11orf49-209ENST00000526424 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
C11orf49-209ENST00000526424 KCNA4P22459 653 aa18.47■□□□□ 0.55
C11orf49-209ENST00000526424 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
C11orf49-209ENST00000526424 CUX2O14529 1486 aa18.44■□□□□ 0.54
C11orf49-209ENST00000526424 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
C11orf49-209ENST00000526424 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
C11orf49-209ENST00000526424 WDR62O43379 1518 aa18.38■□□□□ 0.53
C11orf49-209ENST00000526424 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
C11orf49-209ENST00000526424 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
C11orf49-209ENST00000526424 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
C11orf49-209ENST00000526424 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
C11orf49-209ENST00000526424 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
C11orf49-209ENST00000526424 TOPBP1Q92547 1522 aa18.19■□□□□ 0.5
C11orf49-209ENST00000526424 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
C11orf49-209ENST00000526424 HOXD11P31277 338 aaPredicted RBP18.14■□□□□ 0.49
C11orf49-209ENST00000526424 CUX1P39880 1505 aa18.09■□□□□ 0.49
C11orf49-209ENST00000526424 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
C11orf49-209ENST00000526424 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
C11orf49-209ENST00000526424 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
C11orf49-209ENST00000526424 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
C11orf49-209ENST00000526424 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
C11orf49-209ENST00000526424 TOP2BQ02880 1626 aa18■□□□□ 0.47
C11orf49-209ENST00000526424 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
C11orf49-209ENST00000526424 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
C11orf49-209ENST00000526424 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
C11orf49-209ENST00000526424 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
C11orf49-209ENST00000526424 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
C11orf49-209ENST00000526424 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
C11orf49-209ENST00000526424 SOGA1O94964 1423 aa17.93■□□□□ 0.46
C11orf49-209ENST00000526424 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
C11orf49-209ENST00000526424 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.45
C11orf49-209ENST00000526424 ABCA5Q8WWZ7 1642 aa17.82■□□□□ 0.44
C11orf49-209ENST00000526424 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
C11orf49-209ENST00000526424 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
C11orf49-209ENST00000526424 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
C11orf49-209ENST00000526424 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
C11orf49-209ENST00000526424 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
C11orf49-209ENST00000526424 CHD1O14646 1710 aa17.72■□□□□ 0.43
C11orf49-209ENST00000526424 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
C11orf49-209ENST00000526424 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
C11orf49-209ENST00000526424 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
C11orf49-209ENST00000526424 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
C11orf49-209ENST00000526424 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
C11orf49-209ENST00000526424 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms