RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
TRIM49D2-201ENST00000526396 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
TRIM49D2-201ENST00000526396 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
TRIM49D2-201ENST00000526396 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
TRIM49D2-201ENST00000526396 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
TRIM49D2-201ENST00000526396 ABCC9O60706 1549 aa18.17■□□□□ 0.5
TRIM49D2-201ENST00000526396 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.49
TRIM49D2-201ENST00000526396 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
TRIM49D2-201ENST00000526396 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
TRIM49D2-201ENST00000526396 NACADO15069 1562 aa17.51■□□□□ 0.39
TRIM49D2-201ENST00000526396 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
TRIM49D2-201ENST00000526396 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
TRIM49D2-201ENST00000526396 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
TRIM49D2-201ENST00000526396 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
TRIM49D2-201ENST00000526396 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
TRIM49D2-201ENST00000526396 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
TRIM49D2-201ENST00000526396 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
TRIM49D2-201ENST00000526396 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM49D2-201ENST00000526396 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
TRIM49D2-201ENST00000526396 FOXD1Q16676 465 aa16.74■□□□□ 0.27
TRIM49D2-201ENST00000526396 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
TRIM49D2-201ENST00000526396 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
TRIM49D2-201ENST00000526396 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
TRIM49D2-201ENST00000526396 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
TRIM49D2-201ENST00000526396 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
TRIM49D2-201ENST00000526396 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
TRIM49D2-201ENST00000526396 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
TRIM49D2-201ENST00000526396 ADRA2BP18089 450 aa16.37■□□□□ 0.21
TRIM49D2-201ENST00000526396 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
TRIM49D2-201ENST00000526396 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
TRIM49D2-201ENST00000526396 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
TRIM49D2-201ENST00000526396 WIZO95785 1651 aa16.22■□□□□ 0.19
TRIM49D2-201ENST00000526396 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
TRIM49D2-201ENST00000526396 SMARCA2P51531 1590 aa16.2■□□□□ 0.18
TRIM49D2-201ENST00000526396 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
TRIM49D2-201ENST00000526396 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
TRIM49D2-201ENST00000526396 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
TRIM49D2-201ENST00000526396 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
TRIM49D2-201ENST00000526396 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
TRIM49D2-201ENST00000526396 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
TRIM49D2-201ENST00000526396 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
TRIM49D2-201ENST00000526396 NESP48681 1621 aa15.82■□□□□ 0.12
TRIM49D2-201ENST00000526396 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
TRIM49D2-201ENST00000526396 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
TRIM49D2-201ENST00000526396 CFTRP13569 1480 aa15.69■□□□□ 0.1
TRIM49D2-201ENST00000526396 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
TRIM49D2-201ENST00000526396 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
TRIM49D2-201ENST00000526396 FANCD2Q9BXW9 1451 aa15.58■□□□□ 0.08
TRIM49D2-201ENST00000526396 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
TRIM49D2-201ENST00000526396 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
TRIM49D2-201ENST00000526396 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
TRIM49D2-201ENST00000526396 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
TRIM49D2-201ENST00000526396 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
TRIM49D2-201ENST00000526396 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
TRIM49D2-201ENST00000526396 WDR62O43379 1518 aa15.4■□□□□ 0.06
TRIM49D2-201ENST00000526396 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
TRIM49D2-201ENST00000526396 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
TRIM49D2-201ENST00000526396 CUX1P39880 1505 aa15.35■□□□□ 0.05
TRIM49D2-201ENST00000526396 MSH5O43196 834 aa15.34■□□□□ 0.05
TRIM49D2-201ENST00000526396 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
TRIM49D2-201ENST00000526396 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
TRIM49D2-201ENST00000526396 CUX2O14529 1486 aa15.31■□□□□ 0.04
TRIM49D2-201ENST00000526396 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
TRIM49D2-201ENST00000526396 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
TRIM49D2-201ENST00000526396 KCNA4P22459 653 aa15.27■□□□□ 0.04
TRIM49D2-201ENST00000526396 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
TRIM49D2-201ENST00000526396 FGD5Q6ZNL6 1462 aa15.24■□□□□ 0.03
TRIM49D2-201ENST00000526396 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
TRIM49D2-201ENST00000526396 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
TRIM49D2-201ENST00000526396 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.02
TRIM49D2-201ENST00000526396 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
TRIM49D2-201ENST00000526396 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
TRIM49D2-201ENST00000526396 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
TRIM49D2-201ENST00000526396 SOGA1O94964 1423 aa15.15■□□□□ 0.02
TRIM49D2-201ENST00000526396 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
TRIM49D2-201ENST00000526396 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
TRIM49D2-201ENST00000526396 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0.01
TRIM49D2-201ENST00000526396 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM49D2-201ENST00000526396 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
TRIM49D2-201ENST00000526396 TRIM41Q8WV44 630 aa15.05■□□□□ -0
TRIM49D2-201ENST00000526396 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
TRIM49D2-201ENST00000526396 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
TRIM49D2-201ENST00000526396 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
TRIM49D2-201ENST00000526396 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
TRIM49D2-201ENST00000526396 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
TRIM49D2-201ENST00000526396 PBRM1Q86U86 1689 aa14.96□□□□□ -0.01
TRIM49D2-201ENST00000526396 GRIN2BQ13224 1484 aa14.94□□□□□ -0.02
TRIM49D2-201ENST00000526396 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
TRIM49D2-201ENST00000526396 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
TRIM49D2-201ENST00000526396 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
TRIM49D2-201ENST00000526396 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
TRIM49D2-201ENST00000526396 IGF1RP08069 1367 aa14.87□□□□□ -0.03
TRIM49D2-201ENST00000526396 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
TRIM49D2-201ENST00000526396 CHD1O14646 1710 aa14.84□□□□□ -0.03
TRIM49D2-201ENST00000526396 SYNJ2O15056 1496 aa14.83□□□□□ -0.04
TRIM49D2-201ENST00000526396 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.04
TRIM49D2-201ENST00000526396 FBLN2P98095 1184 aa14.82□□□□□ -0.04
TRIM49D2-201ENST00000526396 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
TRIM49D2-201ENST00000526396 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
TRIM49D2-201ENST00000526396 CUL7Q14999 1698 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms