RNA–Protein interactions for RNA: ENST00000526386.5

UBASH3B-203, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-203ENST00000526386 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.18
UBASH3B-203ENST00000526386 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
UBASH3B-203ENST00000526386 ABCC9O60706 1549 aa13.62□□□□□ -0.23
UBASH3B-203ENST00000526386 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
UBASH3B-203ENST00000526386 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
UBASH3B-203ENST00000526386 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
UBASH3B-203ENST00000526386 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
UBASH3B-203ENST00000526386 NACADO15069 1562 aa13.08□□□□□ -0.32
UBASH3B-203ENST00000526386 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
UBASH3B-203ENST00000526386 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
UBASH3B-203ENST00000526386 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
UBASH3B-203ENST00000526386 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
UBASH3B-203ENST00000526386 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
UBASH3B-203ENST00000526386 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-203ENST00000526386 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
UBASH3B-203ENST00000526386 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBASH3B-203ENST00000526386 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
UBASH3B-203ENST00000526386 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
UBASH3B-203ENST00000526386 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
UBASH3B-203ENST00000526386 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-203ENST00000526386 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
UBASH3B-203ENST00000526386 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
UBASH3B-203ENST00000526386 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
UBASH3B-203ENST00000526386 WIZO95785 1651 aa12.31□□□□□ -0.44
UBASH3B-203ENST00000526386 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.44
UBASH3B-203ENST00000526386 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-203ENST00000526386 CHIC1Q5VXU3 224 aa12.19□□□□□ -0.46
UBASH3B-203ENST00000526386 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
UBASH3B-203ENST00000526386 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
UBASH3B-203ENST00000526386 NCAPD3P42695 1498 aa12.12□□□□□ -0.47
UBASH3B-203ENST00000526386 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
UBASH3B-203ENST00000526386 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-203ENST00000526386 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
UBASH3B-203ENST00000526386 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
UBASH3B-203ENST00000526386 CUX2O14529 1486 aa11.85□□□□□ -0.51
UBASH3B-203ENST00000526386 CFTRP13569 1480 aa11.83□□□□□ -0.52
UBASH3B-203ENST00000526386 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
UBASH3B-203ENST00000526386 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
UBASH3B-203ENST00000526386 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
UBASH3B-203ENST00000526386 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.53
UBASH3B-203ENST00000526386 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
UBASH3B-203ENST00000526386 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.53
UBASH3B-203ENST00000526386 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
UBASH3B-203ENST00000526386 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
UBASH3B-203ENST00000526386 PRDM2Q13029 1718 aa11.68□□□□□ -0.54
UBASH3B-203ENST00000526386 NESP48681 1621 aa11.67□□□□□ -0.54
UBASH3B-203ENST00000526386 TOP2BQ02880 1626 aa11.67□□□□□ -0.54
UBASH3B-203ENST00000526386 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
UBASH3B-203ENST00000526386 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.54
UBASH3B-203ENST00000526386 EEA1Q15075 1411 aa11.65□□□□□ -0.54
UBASH3B-203ENST00000526386 CUX1P39880 1505 aa11.65□□□□□ -0.55
UBASH3B-203ENST00000526386 SOGA1O94964 1423 aa11.63□□□□□ -0.55
UBASH3B-203ENST00000526386 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
UBASH3B-203ENST00000526386 FAM9AQ8IZU1 332 aaPredicted RBP11.62□□□□□ -0.55
UBASH3B-203ENST00000526386 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
UBASH3B-203ENST00000526386 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
UBASH3B-203ENST00000526386 RUSC2Q8N2Y8 1516 aa11.59□□□□□ -0.55
UBASH3B-203ENST00000526386 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
UBASH3B-203ENST00000526386 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
UBASH3B-203ENST00000526386 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.56
UBASH3B-203ENST00000526386 DNMBPQ6XZF7 1577 aa11.51□□□□□ -0.57
UBASH3B-203ENST00000526386 WDR62O43379 1518 aa11.5□□□□□ -0.57
UBASH3B-203ENST00000526386 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
UBASH3B-203ENST00000526386 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
UBASH3B-203ENST00000526386 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
UBASH3B-203ENST00000526386 KIF27Q86VH2 1401 aa11.47□□□□□ -0.57
UBASH3B-203ENST00000526386 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
UBASH3B-203ENST00000526386 KIF21BO75037 1637 aa11.46□□□□□ -0.58
UBASH3B-203ENST00000526386 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
UBASH3B-203ENST00000526386 PRXQ9BXM0 1461 aa11.44□□□□□ -0.58
UBASH3B-203ENST00000526386 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
UBASH3B-203ENST00000526386 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
UBASH3B-203ENST00000526386 IGF1RP08069 1367 aa11.42□□□□□ -0.58
UBASH3B-203ENST00000526386 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
UBASH3B-203ENST00000526386 RAD54L2Q9Y4B4 1467 aa11.39□□□□□ -0.59
UBASH3B-203ENST00000526386 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
UBASH3B-203ENST00000526386 ERICH3Q5RHP9 1530 aa11.39□□□□□ -0.59
UBASH3B-203ENST00000526386 UBTFP17480 764 aaKnown RBP11.36□□□□□ -0.59
UBASH3B-203ENST00000526386 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
UBASH3B-203ENST00000526386 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
UBASH3B-203ENST00000526386 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
UBASH3B-203ENST00000526386 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
UBASH3B-203ENST00000526386 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
UBASH3B-203ENST00000526386 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
UBASH3B-203ENST00000526386 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
UBASH3B-203ENST00000526386 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
UBASH3B-203ENST00000526386 CLIP1P30622 1438 aa11.26□□□□□ -0.61
UBASH3B-203ENST00000526386 CUL7Q14999 1698 aa11.24□□□□□ -0.61
UBASH3B-203ENST00000526386 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
UBASH3B-203ENST00000526386 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBASH3B-203ENST00000526386 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
UBASH3B-203ENST00000526386 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
UBASH3B-203ENST00000526386 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
UBASH3B-203ENST00000526386 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
UBASH3B-203ENST00000526386 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
UBASH3B-203ENST00000526386 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
UBASH3B-203ENST00000526386 ARHGAP35Q9NRY4 1499 aa11.17□□□□□ -0.62
UBASH3B-203ENST00000526386 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
UBASH3B-203ENST00000526386 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
UBASH3B-203ENST00000526386 ADAMTS12P58397 1594 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms