RNA–Protein interactions for RNA: ENST00000526317.5

CSRP1-208, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 374 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-208ENST00000526317 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
CSRP1-208ENST00000526317 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
CSRP1-208ENST00000526317 ABCC9O60706 1549 aa21.95■■□□□ 1.1
CSRP1-208ENST00000526317 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
CSRP1-208ENST00000526317 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
CSRP1-208ENST00000526317 NACADO15069 1562 aa21.08■□□□□ 0.97
CSRP1-208ENST00000526317 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
CSRP1-208ENST00000526317 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
CSRP1-208ENST00000526317 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
CSRP1-208ENST00000526317 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
CSRP1-208ENST00000526317 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
CSRP1-208ENST00000526317 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
CSRP1-208ENST00000526317 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
CSRP1-208ENST00000526317 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
CSRP1-208ENST00000526317 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
CSRP1-208ENST00000526317 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
CSRP1-208ENST00000526317 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
CSRP1-208ENST00000526317 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
CSRP1-208ENST00000526317 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
CSRP1-208ENST00000526317 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
CSRP1-208ENST00000526317 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
CSRP1-208ENST00000526317 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
CSRP1-208ENST00000526317 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
CSRP1-208ENST00000526317 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
CSRP1-208ENST00000526317 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
CSRP1-208ENST00000526317 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
CSRP1-208ENST00000526317 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
CSRP1-208ENST00000526317 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
CSRP1-208ENST00000526317 WIZO95785 1651 aa19.29■□□□□ 0.68
CSRP1-208ENST00000526317 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
CSRP1-208ENST00000526317 NESP48681 1621 aa19.01■□□□□ 0.63
CSRP1-208ENST00000526317 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
CSRP1-208ENST00000526317 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
CSRP1-208ENST00000526317 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
CSRP1-208ENST00000526317 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
CSRP1-208ENST00000526317 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
CSRP1-208ENST00000526317 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
CSRP1-208ENST00000526317 CFTRP13569 1480 aa18.81■□□□□ 0.6
CSRP1-208ENST00000526317 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
CSRP1-208ENST00000526317 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
CSRP1-208ENST00000526317 CUX2O14529 1486 aa18.65■□□□□ 0.58
CSRP1-208ENST00000526317 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
CSRP1-208ENST00000526317 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.58
CSRP1-208ENST00000526317 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
CSRP1-208ENST00000526317 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
CSRP1-208ENST00000526317 WDR62O43379 1518 aa18.52■□□□□ 0.56
CSRP1-208ENST00000526317 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
CSRP1-208ENST00000526317 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
CSRP1-208ENST00000526317 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
CSRP1-208ENST00000526317 DNMBPQ6XZF7 1577 aa18.35■□□□□ 0.53
CSRP1-208ENST00000526317 CUX1P39880 1505 aa18.28■□□□□ 0.52
CSRP1-208ENST00000526317 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
CSRP1-208ENST00000526317 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
CSRP1-208ENST00000526317 SOGA1O94964 1423 aa18.22■□□□□ 0.51
CSRP1-208ENST00000526317 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
CSRP1-208ENST00000526317 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
CSRP1-208ENST00000526317 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
CSRP1-208ENST00000526317 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CSRP1-208ENST00000526317 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
CSRP1-208ENST00000526317 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
CSRP1-208ENST00000526317 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
CSRP1-208ENST00000526317 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
CSRP1-208ENST00000526317 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
CSRP1-208ENST00000526317 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
CSRP1-208ENST00000526317 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
CSRP1-208ENST00000526317 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
CSRP1-208ENST00000526317 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
CSRP1-208ENST00000526317 WDR97A6NE52 1622 aa18■□□□□ 0.47
CSRP1-208ENST00000526317 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
CSRP1-208ENST00000526317 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
CSRP1-208ENST00000526317 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
CSRP1-208ENST00000526317 FBLN2P98095 1184 aa17.94■□□□□ 0.46
CSRP1-208ENST00000526317 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
CSRP1-208ENST00000526317 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
CSRP1-208ENST00000526317 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
CSRP1-208ENST00000526317 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
CSRP1-208ENST00000526317 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
CSRP1-208ENST00000526317 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
CSRP1-208ENST00000526317 CHD1O14646 1710 aa17.84■□□□□ 0.45
CSRP1-208ENST00000526317 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
CSRP1-208ENST00000526317 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
CSRP1-208ENST00000526317 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
CSRP1-208ENST00000526317 IGF1RP08069 1367 aa17.79■□□□□ 0.44
CSRP1-208ENST00000526317 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
CSRP1-208ENST00000526317 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
CSRP1-208ENST00000526317 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
CSRP1-208ENST00000526317 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
CSRP1-208ENST00000526317 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
CSRP1-208ENST00000526317 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
CSRP1-208ENST00000526317 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
CSRP1-208ENST00000526317 NUP160Q12769 1436 aa17.64■□□□□ 0.41
CSRP1-208ENST00000526317 CUL7Q14999 1698 aa17.62■□□□□ 0.41
CSRP1-208ENST00000526317 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
CSRP1-208ENST00000526317 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
CSRP1-208ENST00000526317 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
CSRP1-208ENST00000526317 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
CSRP1-208ENST00000526317 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
CSRP1-208ENST00000526317 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
CSRP1-208ENST00000526317 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
CSRP1-208ENST00000526317 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms