RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
AP004247.2-201ENST00000526131 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
AP004247.2-201ENST00000526131 ABCC9O60706 1549 aa22.45■■□□□ 1.18
AP004247.2-201ENST00000526131 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
AP004247.2-201ENST00000526131 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
AP004247.2-201ENST00000526131 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
AP004247.2-201ENST00000526131 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
AP004247.2-201ENST00000526131 NACADO15069 1562 aa21.6■■□□□ 1.05
AP004247.2-201ENST00000526131 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
AP004247.2-201ENST00000526131 DCAF1Q9Y4B6 1507 aa21.52■■□□□ 1.04
AP004247.2-201ENST00000526131 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
AP004247.2-201ENST00000526131 SCRIBQ14160 1630 aa21.28■■□□□ 1
AP004247.2-201ENST00000526131 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
AP004247.2-201ENST00000526131 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
AP004247.2-201ENST00000526131 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
AP004247.2-201ENST00000526131 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
AP004247.2-201ENST00000526131 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
AP004247.2-201ENST00000526131 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
AP004247.2-201ENST00000526131 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
AP004247.2-201ENST00000526131 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
AP004247.2-201ENST00000526131 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
AP004247.2-201ENST00000526131 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
AP004247.2-201ENST00000526131 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
AP004247.2-201ENST00000526131 WIZO95785 1651 aa20.09■□□□□ 0.81
AP004247.2-201ENST00000526131 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
AP004247.2-201ENST00000526131 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
AP004247.2-201ENST00000526131 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
AP004247.2-201ENST00000526131 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
AP004247.2-201ENST00000526131 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
AP004247.2-201ENST00000526131 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
AP004247.2-201ENST00000526131 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
AP004247.2-201ENST00000526131 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
AP004247.2-201ENST00000526131 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
AP004247.2-201ENST00000526131 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
AP004247.2-201ENST00000526131 NESP48681 1621 aa19.52■□□□□ 0.72
AP004247.2-201ENST00000526131 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
AP004247.2-201ENST00000526131 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
AP004247.2-201ENST00000526131 CFTRP13569 1480 aa19.34■□□□□ 0.69
AP004247.2-201ENST00000526131 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
AP004247.2-201ENST00000526131 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
AP004247.2-201ENST00000526131 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
AP004247.2-201ENST00000526131 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
AP004247.2-201ENST00000526131 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
AP004247.2-201ENST00000526131 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
AP004247.2-201ENST00000526131 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
AP004247.2-201ENST00000526131 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
AP004247.2-201ENST00000526131 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
AP004247.2-201ENST00000526131 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
AP004247.2-201ENST00000526131 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
AP004247.2-201ENST00000526131 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
AP004247.2-201ENST00000526131 WDR62O43379 1518 aa18.95■□□□□ 0.62
AP004247.2-201ENST00000526131 CUX1P39880 1505 aa18.95■□□□□ 0.62
AP004247.2-201ENST00000526131 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
AP004247.2-201ENST00000526131 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
AP004247.2-201ENST00000526131 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
AP004247.2-201ENST00000526131 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
AP004247.2-201ENST00000526131 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
AP004247.2-201ENST00000526131 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
AP004247.2-201ENST00000526131 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.61
AP004247.2-201ENST00000526131 CUX2O14529 1486 aa18.83■□□□□ 0.6
AP004247.2-201ENST00000526131 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
AP004247.2-201ENST00000526131 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
AP004247.2-201ENST00000526131 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
AP004247.2-201ENST00000526131 SOGA1O94964 1423 aa18.76■□□□□ 0.59
AP004247.2-201ENST00000526131 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
AP004247.2-201ENST00000526131 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
AP004247.2-201ENST00000526131 ZNF608Q9ULD9 1512 aaPredicted RBP18.7■□□□□ 0.58
AP004247.2-201ENST00000526131 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
AP004247.2-201ENST00000526131 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.58
AP004247.2-201ENST00000526131 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
AP004247.2-201ENST00000526131 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
AP004247.2-201ENST00000526131 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
AP004247.2-201ENST00000526131 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
AP004247.2-201ENST00000526131 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
AP004247.2-201ENST00000526131 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
AP004247.2-201ENST00000526131 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
AP004247.2-201ENST00000526131 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
AP004247.2-201ENST00000526131 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
AP004247.2-201ENST00000526131 FBLN2P98095 1184 aa18.47■□□□□ 0.55
AP004247.2-201ENST00000526131 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
AP004247.2-201ENST00000526131 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
AP004247.2-201ENST00000526131 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
AP004247.2-201ENST00000526131 CHD1O14646 1710 aa18.38■□□□□ 0.53
AP004247.2-201ENST00000526131 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
AP004247.2-201ENST00000526131 IGF1RP08069 1367 aa18.37■□□□□ 0.53
AP004247.2-201ENST00000526131 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
AP004247.2-201ENST00000526131 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
AP004247.2-201ENST00000526131 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
AP004247.2-201ENST00000526131 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
AP004247.2-201ENST00000526131 CUL7Q14999 1698 aa18.32■□□□□ 0.52
AP004247.2-201ENST00000526131 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
AP004247.2-201ENST00000526131 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
AP004247.2-201ENST00000526131 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
AP004247.2-201ENST00000526131 EEA1Q15075 1411 aa18.29■□□□□ 0.52
AP004247.2-201ENST00000526131 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
AP004247.2-201ENST00000526131 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
AP004247.2-201ENST00000526131 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
AP004247.2-201ENST00000526131 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
AP004247.2-201ENST00000526131 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
AP004247.2-201ENST00000526131 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms