RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-216ENST00000525997 NISCHQ9Y2I1 1504 aa12.25□□□□□ -0.45
PUM1-216ENST00000525997 AEBP2Q6ZN18 517 aaPredicted RBP11.41□□□□□ -0.58
PUM1-216ENST00000525997 CHIC1Q5VXU3 224 aa10.96□□□□□ -0.65
PUM1-216ENST00000525997 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
PUM1-216ENST00000525997 ABCC9O60706 1549 aa10.4□□□□□ -0.74
PUM1-216ENST00000525997 ZCCHC6Q5VYS8 1495 aaKnown RBP10.25□□□□□ -0.77
PUM1-216ENST00000525997 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
PUM1-216ENST00000525997 MYO15BQ96JP2 1530 aa10.18□□□□□ -0.78
PUM1-216ENST00000525997 NACADO15069 1562 aa10.16□□□□□ -0.78
PUM1-216ENST00000525997 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
PUM1-216ENST00000525997 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
PUM1-216ENST00000525997 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
PUM1-216ENST00000525997 UNC13AQ9UPW8 1703 aa9.83□□□□□ -0.84
PUM1-216ENST00000525997 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
PUM1-216ENST00000525997 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
PUM1-216ENST00000525997 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
PUM1-216ENST00000525997 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
PUM1-216ENST00000525997 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
PUM1-216ENST00000525997 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.86
PUM1-216ENST00000525997 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
PUM1-216ENST00000525997 EIF4G1Q04637 1599 aaKnown RBP9.49□□□□□ -0.89
PUM1-216ENST00000525997 SMARCA4P51532 1647 aa9.46□□□□□ -0.89
PUM1-216ENST00000525997 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
PUM1-216ENST00000525997 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
PUM1-216ENST00000525997 CC2D2AQ9P2K1 1620 aa9.42□□□□□ -0.9
PUM1-216ENST00000525997 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
PUM1-216ENST00000525997 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.9
PUM1-216ENST00000525997 PEG3Q9GZU2 1588 aa9.39□□□□□ -0.91
PUM1-216ENST00000525997 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
PUM1-216ENST00000525997 ATAD2BQ9ULI0 1458 aa9.35□□□□□ -0.91
PUM1-216ENST00000525997 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
PUM1-216ENST00000525997 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
PUM1-216ENST00000525997 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
PUM1-216ENST00000525997 WIZO95785 1651 aa9.3□□□□□ -0.92
PUM1-216ENST00000525997 TOP2AP11388 1531 aaKnown RBP9.29□□□□□ -0.92
PUM1-216ENST00000525997 SUPT5HO00267 1087 aaKnown RBP9.28□□□□□ -0.92
PUM1-216ENST00000525997 CCDC88BA6NC98 1476 aa9.13□□□□□ -0.95
PUM1-216ENST00000525997 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
PUM1-216ENST00000525997 CADPSQ9ULU8 1353 aa9.09□□□□□ -0.95
PUM1-216ENST00000525997 CFTRP13569 1480 aa9.07□□□□□ -0.96
PUM1-216ENST00000525997 PDS5BQ9NTI5 1447 aa9.04□□□□□ -0.96
PUM1-216ENST00000525997 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
PUM1-216ENST00000525997 NESP48681 1621 aa9.03□□□□□ -0.96
PUM1-216ENST00000525997 FOXD1Q16676 465 aa9.02□□□□□ -0.97
PUM1-216ENST00000525997 ERCC6Q03468 1493 aa8.98□□□□□ -0.97
PUM1-216ENST00000525997 FANCD2Q9BXW9 1451 aa8.97□□□□□ -0.97
PUM1-216ENST00000525997 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
PUM1-216ENST00000525997 ABCC8Q09428 1581 aa8.94□□□□□ -0.98
PUM1-216ENST00000525997 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
PUM1-216ENST00000525997 MRC2Q9UBG0 1479 aa8.91□□□□□ -0.98
PUM1-216ENST00000525997 THOC2Q8NI27 1593 aaKnown RBP8.89□□□□□ -0.99
PUM1-216ENST00000525997 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
PUM1-216ENST00000525997 CUX2O14529 1486 aa8.88□□□□□ -0.99
PUM1-216ENST00000525997 DNMBPQ6XZF7 1577 aa8.87□□□□□ -0.99
PUM1-216ENST00000525997 WDR62O43379 1518 aa8.86□□□□□ -0.99
PUM1-216ENST00000525997 URB2Q14146 1524 aaKnown RBP8.84□□□□□ -0.99
PUM1-216ENST00000525997 TOPBP1Q92547 1522 aa8.84□□□□□ -0.99
PUM1-216ENST00000525997 TOP2BQ02880 1626 aa8.83□□□□□ -1
PUM1-216ENST00000525997 PLPPR3Q6T4P5 718 aa8.83□□□□□ -1
PUM1-216ENST00000525997 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
PUM1-216ENST00000525997 CUX1P39880 1505 aa8.82□□□□□ -1
PUM1-216ENST00000525997 TRIM41Q8WV44 630 aa8.81□□□□□ -1
PUM1-216ENST00000525997 SYNJ1O43426 1573 aa8.8□□□□□ -1
PUM1-216ENST00000525997 FGD5Q6ZNL6 1462 aa8.79□□□□□ -1
PUM1-216ENST00000525997 IFT140Q96RY7 1462 aa8.78□□□□□ -1
PUM1-216ENST00000525997 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1
PUM1-216ENST00000525997 WDR97A6NE52 1622 aa8.76□□□□□ -1.01
PUM1-216ENST00000525997 SOGA1O94964 1423 aa8.76□□□□□ -1.01
PUM1-216ENST00000525997 ABCA10Q8WWZ4 1543 aa8.73□□□□□ -1.01
PUM1-216ENST00000525997 EEA1Q15075 1411 aa8.72□□□□□ -1.01
PUM1-216ENST00000525997 KIF27Q86VH2 1401 aa8.71□□□□□ -1.01
PUM1-216ENST00000525997 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.02
PUM1-216ENST00000525997 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
PUM1-216ENST00000525997 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
PUM1-216ENST00000525997 EIF4G3O43432 1585 aaKnown RBP8.66□□□□□ -1.02
PUM1-216ENST00000525997 GRIN2BQ13224 1484 aa8.66□□□□□ -1.02
PUM1-216ENST00000525997 ABCA5Q8WWZ7 1642 aa8.65□□□□□ -1.02
PUM1-216ENST00000525997 ERICH3Q5RHP9 1530 aa8.65□□□□□ -1.02
PUM1-216ENST00000525997 ZNF608Q9ULD9 1512 aaPredicted RBP8.64□□□□□ -1.03
PUM1-216ENST00000525997 TDRD9Q8NDG6 1382 aaKnown RBP8.64□□□□□ -1.03
PUM1-216ENST00000525997 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
PUM1-216ENST00000525997 AQRO60306 1485 aaKnown RBP eCLIP8.63□□□□□ -1.031e-7■■■■■ 27.9
PUM1-216ENST00000525997 CUL7Q14999 1698 aa8.62□□□□□ -1.03
PUM1-216ENST00000525997 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
PUM1-216ENST00000525997 CSRNP3Q8WYN3 585 aa8.6□□□□□ -1.03
PUM1-216ENST00000525997 PPP6R1Q9UPN7 881 aa8.6□□□□□ -1.03
PUM1-216ENST00000525997 FHAD1B1AJZ9 1412 aa8.6□□□□□ -1.03
PUM1-216ENST00000525997 ADRA2BP18089 450 aa8.59□□□□□ -1.03
PUM1-216ENST00000525997 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
PUM1-216ENST00000525997 IGF1RP08069 1367 aa8.58□□□□□ -1.04
PUM1-216ENST00000525997 CARMIL1Q5VZK9 1371 aa8.58□□□□□ -1.04
PUM1-216ENST00000525997 SYNJ2O15056 1496 aa8.57□□□□□ -1.04
PUM1-216ENST00000525997 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
PUM1-216ENST00000525997 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
PUM1-216ENST00000525997 CHMP7Q8WUX9 453 aaPredicted RBP8.56□□□□□ -1.04
PUM1-216ENST00000525997 RAPGEF2Q9Y4G8 1499 aa8.56□□□□□ -1.04
PUM1-216ENST00000525997 RUSC2Q8N2Y8 1516 aa8.55□□□□□ -1.04
PUM1-216ENST00000525997 KIF21BO75037 1637 aa8.55□□□□□ -1.04
PUM1-216ENST00000525997 PRXQ9BXM0 1461 aa8.55□□□□□ -1.04
PUM1-216ENST00000525997 GOLGA3Q08378 1498 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms