RNA–Protein interactions for RNA: ENST00000525984.2

AP003063.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.2, Length 2,067 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.2-201ENST00000525984 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
AP003063.2-201ENST00000525984 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
AP003063.2-201ENST00000525984 ABCC9O60706 1549 aa25.02■■□□□ 1.6
AP003063.2-201ENST00000525984 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
AP003063.2-201ENST00000525984 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
AP003063.2-201ENST00000525984 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
AP003063.2-201ENST00000525984 NACADO15069 1562 aa24.36■■□□□ 1.49
AP003063.2-201ENST00000525984 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
AP003063.2-201ENST00000525984 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
AP003063.2-201ENST00000525984 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
AP003063.2-201ENST00000525984 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
AP003063.2-201ENST00000525984 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
AP003063.2-201ENST00000525984 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
AP003063.2-201ENST00000525984 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
AP003063.2-201ENST00000525984 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
AP003063.2-201ENST00000525984 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
AP003063.2-201ENST00000525984 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
AP003063.2-201ENST00000525984 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
AP003063.2-201ENST00000525984 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
AP003063.2-201ENST00000525984 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
AP003063.2-201ENST00000525984 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
AP003063.2-201ENST00000525984 WIZO95785 1651 aa22.82■■□□□ 1.24
AP003063.2-201ENST00000525984 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
AP003063.2-201ENST00000525984 SMARCA2P51531 1590 aa22.64■■□□□ 1.21
AP003063.2-201ENST00000525984 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
AP003063.2-201ENST00000525984 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
AP003063.2-201ENST00000525984 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
AP003063.2-201ENST00000525984 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
AP003063.2-201ENST00000525984 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
AP003063.2-201ENST00000525984 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
AP003063.2-201ENST00000525984 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
AP003063.2-201ENST00000525984 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
AP003063.2-201ENST00000525984 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
AP003063.2-201ENST00000525984 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
AP003063.2-201ENST00000525984 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
AP003063.2-201ENST00000525984 CFTRP13569 1480 aa21.93■■□□□ 1.1
AP003063.2-201ENST00000525984 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
AP003063.2-201ENST00000525984 NESP48681 1621 aa21.85■■□□□ 1.09
AP003063.2-201ENST00000525984 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
AP003063.2-201ENST00000525984 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
AP003063.2-201ENST00000525984 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
AP003063.2-201ENST00000525984 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
AP003063.2-201ENST00000525984 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
AP003063.2-201ENST00000525984 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
AP003063.2-201ENST00000525984 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
AP003063.2-201ENST00000525984 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
AP003063.2-201ENST00000525984 CUX1P39880 1505 aa21.54■■□□□ 1.04
AP003063.2-201ENST00000525984 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
AP003063.2-201ENST00000525984 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
AP003063.2-201ENST00000525984 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
AP003063.2-201ENST00000525984 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
AP003063.2-201ENST00000525984 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
AP003063.2-201ENST00000525984 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
AP003063.2-201ENST00000525984 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
AP003063.2-201ENST00000525984 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
AP003063.2-201ENST00000525984 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
AP003063.2-201ENST00000525984 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
AP003063.2-201ENST00000525984 SOGA1O94964 1423 aa21.36■■□□□ 1.01
AP003063.2-201ENST00000525984 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
AP003063.2-201ENST00000525984 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
AP003063.2-201ENST00000525984 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
AP003063.2-201ENST00000525984 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
AP003063.2-201ENST00000525984 WDR62O43379 1518 aa21.24■□□□□ 0.99
AP003063.2-201ENST00000525984 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
AP003063.2-201ENST00000525984 EEA1Q15075 1411 aa21.22■□□□□ 0.99
AP003063.2-201ENST00000525984 CUX2O14529 1486 aa21.22■□□□□ 0.99
AP003063.2-201ENST00000525984 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
AP003063.2-201ENST00000525984 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
AP003063.2-201ENST00000525984 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
AP003063.2-201ENST00000525984 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
AP003063.2-201ENST00000525984 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
AP003063.2-201ENST00000525984 IFT140Q96RY7 1462 aa21.08■□□□□ 0.96
AP003063.2-201ENST00000525984 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
AP003063.2-201ENST00000525984 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
AP003063.2-201ENST00000525984 IGF1RP08069 1367 aa21.01■□□□□ 0.95
AP003063.2-201ENST00000525984 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
AP003063.2-201ENST00000525984 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.95
AP003063.2-201ENST00000525984 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
AP003063.2-201ENST00000525984 ZNF608Q9ULD9 1512 aaPredicted RBP21■□□□□ 0.95
AP003063.2-201ENST00000525984 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
AP003063.2-201ENST00000525984 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
AP003063.2-201ENST00000525984 KIF21BO75037 1637 aa20.93■□□□□ 0.94
AP003063.2-201ENST00000525984 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
AP003063.2-201ENST00000525984 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
AP003063.2-201ENST00000525984 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
AP003063.2-201ENST00000525984 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
AP003063.2-201ENST00000525984 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
AP003063.2-201ENST00000525984 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
AP003063.2-201ENST00000525984 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
AP003063.2-201ENST00000525984 CUL7Q14999 1698 aa20.84■□□□□ 0.93
AP003063.2-201ENST00000525984 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
AP003063.2-201ENST00000525984 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
AP003063.2-201ENST00000525984 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
AP003063.2-201ENST00000525984 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
AP003063.2-201ENST00000525984 FBLN2P98095 1184 aa20.76■□□□□ 0.91
AP003063.2-201ENST00000525984 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
AP003063.2-201ENST00000525984 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
AP003063.2-201ENST00000525984 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
AP003063.2-201ENST00000525984 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
AP003063.2-201ENST00000525984 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms