RNA–Protein interactions for RNA: ENST00000525952.1

AP002957.1-201, humanhuman

TSL 3 BASIC

Gene AP002957.1, Length 406 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002957.1-201ENST00000525952 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
AP002957.1-201ENST00000525952 ABCC9O60706 1549 aa19.39■□□□□ 0.69
AP002957.1-201ENST00000525952 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
AP002957.1-201ENST00000525952 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
AP002957.1-201ENST00000525952 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
AP002957.1-201ENST00000525952 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
AP002957.1-201ENST00000525952 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
AP002957.1-201ENST00000525952 NACADO15069 1562 aa17.88■□□□□ 0.45
AP002957.1-201ENST00000525952 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
AP002957.1-201ENST00000525952 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
AP002957.1-201ENST00000525952 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
AP002957.1-201ENST00000525952 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
AP002957.1-201ENST00000525952 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
AP002957.1-201ENST00000525952 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
AP002957.1-201ENST00000525952 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
AP002957.1-201ENST00000525952 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
AP002957.1-201ENST00000525952 CUX2O14529 1486 aa17.19■□□□□ 0.34
AP002957.1-201ENST00000525952 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
AP002957.1-201ENST00000525952 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
AP002957.1-201ENST00000525952 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
AP002957.1-201ENST00000525952 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
AP002957.1-201ENST00000525952 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
AP002957.1-201ENST00000525952 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
AP002957.1-201ENST00000525952 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
AP002957.1-201ENST00000525952 NESP48681 1621 aa16.41■□□□□ 0.22
AP002957.1-201ENST00000525952 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
AP002957.1-201ENST00000525952 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
AP002957.1-201ENST00000525952 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
AP002957.1-201ENST00000525952 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
AP002957.1-201ENST00000525952 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
AP002957.1-201ENST00000525952 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
AP002957.1-201ENST00000525952 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
AP002957.1-201ENST00000525952 KIF21AQ7Z4S6 1674 aa16.13■□□□□ 0.17
AP002957.1-201ENST00000525952 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
AP002957.1-201ENST00000525952 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
AP002957.1-201ENST00000525952 WDR62O43379 1518 aa16.08■□□□□ 0.16
AP002957.1-201ENST00000525952 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
AP002957.1-201ENST00000525952 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
AP002957.1-201ENST00000525952 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
AP002957.1-201ENST00000525952 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
AP002957.1-201ENST00000525952 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
AP002957.1-201ENST00000525952 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
AP002957.1-201ENST00000525952 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
AP002957.1-201ENST00000525952 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
AP002957.1-201ENST00000525952 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
AP002957.1-201ENST00000525952 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
AP002957.1-201ENST00000525952 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
AP002957.1-201ENST00000525952 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
AP002957.1-201ENST00000525952 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
AP002957.1-201ENST00000525952 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
AP002957.1-201ENST00000525952 WIZO95785 1651 aa15.7■□□□□ 0.1
AP002957.1-201ENST00000525952 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
AP002957.1-201ENST00000525952 URB2Q14146 1524 aaKnown RBP15.64■□□□□ 0.09
AP002957.1-201ENST00000525952 CFTRP13569 1480 aa15.61■□□□□ 0.09
AP002957.1-201ENST00000525952 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
AP002957.1-201ENST00000525952 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
AP002957.1-201ENST00000525952 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
AP002957.1-201ENST00000525952 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
AP002957.1-201ENST00000525952 CHD1O14646 1710 aa15.43■□□□□ 0.06
AP002957.1-201ENST00000525952 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
AP002957.1-201ENST00000525952 FBLN2P98095 1184 aa15.36■□□□□ 0.05
AP002957.1-201ENST00000525952 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
AP002957.1-201ENST00000525952 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
AP002957.1-201ENST00000525952 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
AP002957.1-201ENST00000525952 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.05
AP002957.1-201ENST00000525952 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.05
AP002957.1-201ENST00000525952 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
AP002957.1-201ENST00000525952 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.03
AP002957.1-201ENST00000525952 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
AP002957.1-201ENST00000525952 GAPVD1Q14C86 1478 aa15.23■□□□□ 0.03
AP002957.1-201ENST00000525952 KDM4FA0A1W2PPD8 638 aa15.21■□□□□ 0.03
AP002957.1-201ENST00000525952 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
AP002957.1-201ENST00000525952 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
AP002957.1-201ENST00000525952 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
AP002957.1-201ENST00000525952 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
AP002957.1-201ENST00000525952 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
AP002957.1-201ENST00000525952 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
AP002957.1-201ENST00000525952 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
AP002957.1-201ENST00000525952 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
AP002957.1-201ENST00000525952 SOGA1O94964 1423 aa15.07■□□□□ 0
AP002957.1-201ENST00000525952 KIF13AQ9H1H9 1805 aa15.06■□□□□ 0
AP002957.1-201ENST00000525952 GRIN2BQ13224 1484 aa15.04■□□□□ -0
AP002957.1-201ENST00000525952 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
AP002957.1-201ENST00000525952 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
AP002957.1-201ENST00000525952 FBXO41Q8TF61 875 aa14.99□□□□□ -0.01
AP002957.1-201ENST00000525952 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
AP002957.1-201ENST00000525952 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
AP002957.1-201ENST00000525952 KDM6BO15054 1643 aa14.92□□□□□ -0.02
AP002957.1-201ENST00000525952 CUX1P39880 1505 aa14.9□□□□□ -0.02
AP002957.1-201ENST00000525952 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
AP002957.1-201ENST00000525952 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
AP002957.1-201ENST00000525952 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
AP002957.1-201ENST00000525952 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
AP002957.1-201ENST00000525952 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
AP002957.1-201ENST00000525952 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
AP002957.1-201ENST00000525952 NUP160Q12769 1436 aa14.85□□□□□ -0.03
AP002957.1-201ENST00000525952 DIP2BQ9P265 1576 aa14.84□□□□□ -0.03
AP002957.1-201ENST00000525952 ADGRL1O94910 1474 aa14.83□□□□□ -0.03
AP002957.1-201ENST00000525952 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
AP002957.1-201ENST00000525952 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms