RNA–Protein interactions for RNA: ENST00000525914.5

LMO7-217, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-217ENST00000525914 NISCHQ9Y2I1 1504 aa34.4■■■■□ 3.1
LMO7-217ENST00000525914 AEBP2Q6ZN18 517 aaPredicted RBP31.58■■■□□ 2.65
LMO7-217ENST00000525914 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
LMO7-217ENST00000525914 ABCC9O60706 1549 aa29.72■■■□□ 2.35
LMO7-217ENST00000525914 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
LMO7-217ENST00000525914 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
LMO7-217ENST00000525914 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
LMO7-217ENST00000525914 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
LMO7-217ENST00000525914 NACADO15069 1562 aa28.63■■■□□ 2.17
LMO7-217ENST00000525914 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
LMO7-217ENST00000525914 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
LMO7-217ENST00000525914 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
LMO7-217ENST00000525914 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
LMO7-217ENST00000525914 PABPN1Q86U42 306 aaKnown RBP eCLIP27.79■■■□□ 2.04
LMO7-217ENST00000525914 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
LMO7-217ENST00000525914 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
LMO7-217ENST00000525914 DNAJC5BQ9UF47 199 aa27.04■■□□□ 1.92
LMO7-217ENST00000525914 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
LMO7-217ENST00000525914 SENP3Q9H4L4 574 aaPredicted RBP26.94■■□□□ 1.9
LMO7-217ENST00000525914 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
LMO7-217ENST00000525914 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
LMO7-217ENST00000525914 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
LMO7-217ENST00000525914 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
LMO7-217ENST00000525914 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
LMO7-217ENST00000525914 PHF23Q9BUL5 403 aaPredicted RBP26.55■■□□□ 1.84
LMO7-217ENST00000525914 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
LMO7-217ENST00000525914 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
LMO7-217ENST00000525914 WIZO95785 1651 aa26.37■■□□□ 1.81
LMO7-217ENST00000525914 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
LMO7-217ENST00000525914 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
LMO7-217ENST00000525914 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
LMO7-217ENST00000525914 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
LMO7-217ENST00000525914 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
LMO7-217ENST00000525914 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
LMO7-217ENST00000525914 SUPT5HO00267 1087 aaKnown RBP25.87■■□□□ 1.73
LMO7-217ENST00000525914 NESP48681 1621 aa25.78■■□□□ 1.72
LMO7-217ENST00000525914 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
LMO7-217ENST00000525914 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
LMO7-217ENST00000525914 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
LMO7-217ENST00000525914 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
LMO7-217ENST00000525914 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
LMO7-217ENST00000525914 PRDM2Q13029 1718 aa25.58■■□□□ 1.69
LMO7-217ENST00000525914 CFTRP13569 1480 aa25.51■■□□□ 1.67
LMO7-217ENST00000525914 PDS5BQ9NTI5 1447 aa25.49■■□□□ 1.67
LMO7-217ENST00000525914 FANCD2Q9BXW9 1451 aa25.38■■□□□ 1.65
LMO7-217ENST00000525914 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
LMO7-217ENST00000525914 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
LMO7-217ENST00000525914 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
LMO7-217ENST00000525914 CUX2O14529 1486 aa25.18■■□□□ 1.62
LMO7-217ENST00000525914 FOXD1Q16676 465 aa25.16■■□□□ 1.62
LMO7-217ENST00000525914 WDR62O43379 1518 aa25.15■■□□□ 1.62
LMO7-217ENST00000525914 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
LMO7-217ENST00000525914 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
LMO7-217ENST00000525914 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
LMO7-217ENST00000525914 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
LMO7-217ENST00000525914 CUX1P39880 1505 aa24.9■■□□□ 1.58
LMO7-217ENST00000525914 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
LMO7-217ENST00000525914 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
LMO7-217ENST00000525914 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
LMO7-217ENST00000525914 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
LMO7-217ENST00000525914 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
LMO7-217ENST00000525914 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
LMO7-217ENST00000525914 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
LMO7-217ENST00000525914 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
LMO7-217ENST00000525914 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
LMO7-217ENST00000525914 SOGA1O94964 1423 aa24.69■■□□□ 1.54
LMO7-217ENST00000525914 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
LMO7-217ENST00000525914 WDR97A6NE52 1622 aa24.64■■□□□ 1.53
LMO7-217ENST00000525914 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
LMO7-217ENST00000525914 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.521e-9■□□□□ 10.7
LMO7-217ENST00000525914 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
LMO7-217ENST00000525914 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
LMO7-217ENST00000525914 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
LMO7-217ENST00000525914 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
LMO7-217ENST00000525914 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
LMO7-217ENST00000525914 CHD1O14646 1710 aa24.39■■□□□ 1.5
LMO7-217ENST00000525914 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
LMO7-217ENST00000525914 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
LMO7-217ENST00000525914 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
LMO7-217ENST00000525914 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
LMO7-217ENST00000525914 FBLN2P98095 1184 aa24.28■■□□□ 1.48
LMO7-217ENST00000525914 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
LMO7-217ENST00000525914 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
LMO7-217ENST00000525914 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
LMO7-217ENST00000525914 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
LMO7-217ENST00000525914 CHMP7Q8WUX9 453 aaPredicted RBP24.19■■□□□ 1.46
LMO7-217ENST00000525914 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
LMO7-217ENST00000525914 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
LMO7-217ENST00000525914 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
LMO7-217ENST00000525914 CUL7Q14999 1698 aa24.12■■□□□ 1.45
LMO7-217ENST00000525914 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
LMO7-217ENST00000525914 IGF1RP08069 1367 aa24.09■■□□□ 1.45
LMO7-217ENST00000525914 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
LMO7-217ENST00000525914 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
LMO7-217ENST00000525914 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
LMO7-217ENST00000525914 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
LMO7-217ENST00000525914 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
LMO7-217ENST00000525914 NUP160Q12769 1436 aa23.92■■□□□ 1.42
LMO7-217ENST00000525914 EEA1Q15075 1411 aa23.88■■□□□ 1.41
LMO7-217ENST00000525914 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms