RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
SSH3-204ENST00000525913 ABCC9O60706 1549 aa17.08■□□□□ 0.32
SSH3-204ENST00000525913 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
SSH3-204ENST00000525913 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
SSH3-204ENST00000525913 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
SSH3-204ENST00000525913 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
SSH3-204ENST00000525913 NACADO15069 1562 aa15.83■□□□□ 0.12
SSH3-204ENST00000525913 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
SSH3-204ENST00000525913 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
SSH3-204ENST00000525913 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
SSH3-204ENST00000525913 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
SSH3-204ENST00000525913 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
SSH3-204ENST00000525913 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
SSH3-204ENST00000525913 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
SSH3-204ENST00000525913 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
SSH3-204ENST00000525913 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
SSH3-204ENST00000525913 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
SSH3-204ENST00000525913 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
SSH3-204ENST00000525913 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
SSH3-204ENST00000525913 CUX2O14529 1486 aa14.89□□□□□ -0.03
SSH3-204ENST00000525913 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
SSH3-204ENST00000525913 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
SSH3-204ENST00000525913 NESP48681 1621 aa14.58□□□□□ -0.08
SSH3-204ENST00000525913 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
SSH3-204ENST00000525913 ATAD2BQ9ULI0 1458 aa14.54□□□□□ -0.08
SSH3-204ENST00000525913 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
SSH3-204ENST00000525913 HMGXB3Q12766 1538 aa14.46□□□□□ -0.1
SSH3-204ENST00000525913 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
SSH3-204ENST00000525913 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
SSH3-204ENST00000525913 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
SSH3-204ENST00000525913 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
SSH3-204ENST00000525913 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
SSH3-204ENST00000525913 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
SSH3-204ENST00000525913 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
SSH3-204ENST00000525913 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
SSH3-204ENST00000525913 WDR62O43379 1518 aa14.19□□□□□ -0.14
SSH3-204ENST00000525913 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
SSH3-204ENST00000525913 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
SSH3-204ENST00000525913 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
SSH3-204ENST00000525913 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
SSH3-204ENST00000525913 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
SSH3-204ENST00000525913 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
SSH3-204ENST00000525913 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
SSH3-204ENST00000525913 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
SSH3-204ENST00000525913 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
SSH3-204ENST00000525913 WIZO95785 1651 aa13.95□□□□□ -0.18
SSH3-204ENST00000525913 ARHGEF11O15085 1522 aa13.93□□□□□ -0.18
SSH3-204ENST00000525913 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
SSH3-204ENST00000525913 CFTRP13569 1480 aa13.92□□□□□ -0.18
SSH3-204ENST00000525913 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
SSH3-204ENST00000525913 ZNF608Q9ULD9 1512 aaPredicted RBP13.84□□□□□ -0.19
SSH3-204ENST00000525913 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
SSH3-204ENST00000525913 ARAP1Q96P48 1450 aa13.77□□□□□ -0.21
SSH3-204ENST00000525913 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
SSH3-204ENST00000525913 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
SSH3-204ENST00000525913 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
SSH3-204ENST00000525913 CHD1O14646 1710 aa13.71□□□□□ -0.21
SSH3-204ENST00000525913 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
SSH3-204ENST00000525913 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
SSH3-204ENST00000525913 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
SSH3-204ENST00000525913 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
SSH3-204ENST00000525913 AQRO60306 1485 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSH3-204ENST00000525913 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
SSH3-204ENST00000525913 FBLN2P98095 1184 aa13.6□□□□□ -0.23
SSH3-204ENST00000525913 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
SSH3-204ENST00000525913 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
SSH3-204ENST00000525913 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
SSH3-204ENST00000525913 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
SSH3-204ENST00000525913 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
SSH3-204ENST00000525913 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
SSH3-204ENST00000525913 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
SSH3-204ENST00000525913 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
SSH3-204ENST00000525913 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
SSH3-204ENST00000525913 SOGA1O94964 1423 aa13.45□□□□□ -0.26
SSH3-204ENST00000525913 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
SSH3-204ENST00000525913 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
SSH3-204ENST00000525913 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
SSH3-204ENST00000525913 WDR97A6NE52 1622 aa13.39□□□□□ -0.27
SSH3-204ENST00000525913 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
SSH3-204ENST00000525913 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
SSH3-204ENST00000525913 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
SSH3-204ENST00000525913 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
SSH3-204ENST00000525913 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
SSH3-204ENST00000525913 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
SSH3-204ENST00000525913 CUX1P39880 1505 aa13.29□□□□□ -0.28
SSH3-204ENST00000525913 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
SSH3-204ENST00000525913 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
SSH3-204ENST00000525913 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
SSH3-204ENST00000525913 SHROOM2Q13796 1616 aa13.2□□□□□ -0.3
SSH3-204ENST00000525913 ABCA5Q8WWZ7 1642 aa13.2□□□□□ -0.3
SSH3-204ENST00000525913 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
SSH3-204ENST00000525913 NUP160Q12769 1436 aa13.19□□□□□ -0.3
SSH3-204ENST00000525913 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
SSH3-204ENST00000525913 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
SSH3-204ENST00000525913 ABCC10Q5T3U5 1492 aa13.14□□□□□ -0.31
SSH3-204ENST00000525913 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
SSH3-204ENST00000525913 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
SSH3-204ENST00000525913 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
SSH3-204ENST00000525913 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
SSH3-204ENST00000525913 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms