RNA–Protein interactions for RNA: ENST00000525912.1

LINC01016-203, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 3

Gene LINC01016, Length 396 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-203ENST00000525912 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
LINC01016-203ENST00000525912 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
LINC01016-203ENST00000525912 ABCC9O60706 1549 aa25.35■■□□□ 1.65
LINC01016-203ENST00000525912 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
LINC01016-203ENST00000525912 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
LINC01016-203ENST00000525912 NACADO15069 1562 aa24.31■■□□□ 1.48
LINC01016-203ENST00000525912 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
LINC01016-203ENST00000525912 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
LINC01016-203ENST00000525912 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
LINC01016-203ENST00000525912 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
LINC01016-203ENST00000525912 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
LINC01016-203ENST00000525912 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
LINC01016-203ENST00000525912 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
LINC01016-203ENST00000525912 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
LINC01016-203ENST00000525912 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
LINC01016-203ENST00000525912 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
LINC01016-203ENST00000525912 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
LINC01016-203ENST00000525912 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
LINC01016-203ENST00000525912 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
LINC01016-203ENST00000525912 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
LINC01016-203ENST00000525912 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
LINC01016-203ENST00000525912 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
LINC01016-203ENST00000525912 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
LINC01016-203ENST00000525912 WIZO95785 1651 aa22.46■■□□□ 1.19
LINC01016-203ENST00000525912 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
LINC01016-203ENST00000525912 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
LINC01016-203ENST00000525912 PEG3Q9GZU2 1588 aa22.43■■□□□ 1.18
LINC01016-203ENST00000525912 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
LINC01016-203ENST00000525912 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
LINC01016-203ENST00000525912 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
LINC01016-203ENST00000525912 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
LINC01016-203ENST00000525912 NESP48681 1621 aa22.04■■□□□ 1.12
LINC01016-203ENST00000525912 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
LINC01016-203ENST00000525912 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
LINC01016-203ENST00000525912 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
LINC01016-203ENST00000525912 CFTRP13569 1480 aa21.75■■□□□ 1.07
LINC01016-203ENST00000525912 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
LINC01016-203ENST00000525912 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
LINC01016-203ENST00000525912 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.06
LINC01016-203ENST00000525912 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
LINC01016-203ENST00000525912 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
LINC01016-203ENST00000525912 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
LINC01016-203ENST00000525912 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.04
LINC01016-203ENST00000525912 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
LINC01016-203ENST00000525912 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
LINC01016-203ENST00000525912 WDR62O43379 1518 aa21.4■■□□□ 1.02
LINC01016-203ENST00000525912 CUX2O14529 1486 aa21.38■■□□□ 1.01
LINC01016-203ENST00000525912 TOPBP1Q92547 1522 aa21.3■■□□□ 1
LINC01016-203ENST00000525912 CUX1P39880 1505 aa21.26■□□□□ 0.99
LINC01016-203ENST00000525912 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
LINC01016-203ENST00000525912 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
LINC01016-203ENST00000525912 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
LINC01016-203ENST00000525912 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
LINC01016-203ENST00000525912 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
LINC01016-203ENST00000525912 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
LINC01016-203ENST00000525912 WRNQ14191 1432 aaPredicted RBP eCLIP21.1■□□□□ 0.97
LINC01016-203ENST00000525912 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
LINC01016-203ENST00000525912 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
LINC01016-203ENST00000525912 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
LINC01016-203ENST00000525912 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
LINC01016-203ENST00000525912 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
LINC01016-203ENST00000525912 SOGA1O94964 1423 aa21.03■□□□□ 0.96
LINC01016-203ENST00000525912 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.95
LINC01016-203ENST00000525912 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
LINC01016-203ENST00000525912 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
LINC01016-203ENST00000525912 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
LINC01016-203ENST00000525912 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
LINC01016-203ENST00000525912 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
LINC01016-203ENST00000525912 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
LINC01016-203ENST00000525912 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
LINC01016-203ENST00000525912 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
LINC01016-203ENST00000525912 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
LINC01016-203ENST00000525912 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
LINC01016-203ENST00000525912 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
LINC01016-203ENST00000525912 CHD1O14646 1710 aa20.68■□□□□ 0.9
LINC01016-203ENST00000525912 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
LINC01016-203ENST00000525912 FBLN2P98095 1184 aa20.64■□□□□ 0.89
LINC01016-203ENST00000525912 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
LINC01016-203ENST00000525912 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
LINC01016-203ENST00000525912 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
LINC01016-203ENST00000525912 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
LINC01016-203ENST00000525912 IGF1RP08069 1367 aa20.59■□□□□ 0.89
LINC01016-203ENST00000525912 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.89
LINC01016-203ENST00000525912 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
LINC01016-203ENST00000525912 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
LINC01016-203ENST00000525912 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
LINC01016-203ENST00000525912 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
LINC01016-203ENST00000525912 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
LINC01016-203ENST00000525912 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
LINC01016-203ENST00000525912 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
LINC01016-203ENST00000525912 CARMIL1Q5VZK9 1371 aa20.43■□□□□ 0.86
LINC01016-203ENST00000525912 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
LINC01016-203ENST00000525912 CUL7Q14999 1698 aa20.42■□□□□ 0.86
LINC01016-203ENST00000525912 NUP160Q12769 1436 aa20.39■□□□□ 0.85
LINC01016-203ENST00000525912 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
LINC01016-203ENST00000525912 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
LINC01016-203ENST00000525912 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
LINC01016-203ENST00000525912 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
LINC01016-203ENST00000525912 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
LINC01016-203ENST00000525912 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms