RNA–Protein interactions for RNA: ENST00000525840.1

CHID1-209, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-209ENST00000525840 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
CHID1-209ENST00000525840 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
CHID1-209ENST00000525840 ABCC9O60706 1549 aa19.57■□□□□ 0.72
CHID1-209ENST00000525840 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
CHID1-209ENST00000525840 NACADO15069 1562 aa18.99■□□□□ 0.63
CHID1-209ENST00000525840 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
CHID1-209ENST00000525840 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
CHID1-209ENST00000525840 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
CHID1-209ENST00000525840 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
CHID1-209ENST00000525840 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
CHID1-209ENST00000525840 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
CHID1-209ENST00000525840 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
CHID1-209ENST00000525840 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
CHID1-209ENST00000525840 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHID1-209ENST00000525840 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
CHID1-209ENST00000525840 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
CHID1-209ENST00000525840 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
CHID1-209ENST00000525840 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
CHID1-209ENST00000525840 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
CHID1-209ENST00000525840 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
CHID1-209ENST00000525840 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
CHID1-209ENST00000525840 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
CHID1-209ENST00000525840 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
CHID1-209ENST00000525840 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
CHID1-209ENST00000525840 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
CHID1-209ENST00000525840 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
CHID1-209ENST00000525840 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
CHID1-209ENST00000525840 WIZO95785 1651 aa17.32■□□□□ 0.36
CHID1-209ENST00000525840 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
CHID1-209ENST00000525840 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
CHID1-209ENST00000525840 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
CHID1-209ENST00000525840 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
CHID1-209ENST00000525840 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
CHID1-209ENST00000525840 ERCC6Q03468 1493 aa16.94■□□□□ 0.3
CHID1-209ENST00000525840 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
CHID1-209ENST00000525840 NESP48681 1621 aa16.93■□□□□ 0.3
CHID1-209ENST00000525840 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
CHID1-209ENST00000525840 CFTRP13569 1480 aa16.88■□□□□ 0.29
CHID1-209ENST00000525840 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
CHID1-209ENST00000525840 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
CHID1-209ENST00000525840 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
CHID1-209ENST00000525840 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
CHID1-209ENST00000525840 CUX2O14529 1486 aa16.73■□□□□ 0.27
CHID1-209ENST00000525840 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
CHID1-209ENST00000525840 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
CHID1-209ENST00000525840 WDR62O43379 1518 aa16.64■□□□□ 0.25
CHID1-209ENST00000525840 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
CHID1-209ENST00000525840 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
CHID1-209ENST00000525840 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
CHID1-209ENST00000525840 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
CHID1-209ENST00000525840 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
CHID1-209ENST00000525840 CUX1P39880 1505 aa16.39■□□□□ 0.21
CHID1-209ENST00000525840 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
CHID1-209ENST00000525840 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
CHID1-209ENST00000525840 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
CHID1-209ENST00000525840 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
CHID1-209ENST00000525840 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
CHID1-209ENST00000525840 SOGA1O94964 1423 aa16.33■□□□□ 0.2
CHID1-209ENST00000525840 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
CHID1-209ENST00000525840 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
CHID1-209ENST00000525840 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
CHID1-209ENST00000525840 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
CHID1-209ENST00000525840 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
CHID1-209ENST00000525840 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
CHID1-209ENST00000525840 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
CHID1-209ENST00000525840 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
CHID1-209ENST00000525840 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■■■ 33.1
CHID1-209ENST00000525840 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
CHID1-209ENST00000525840 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
CHID1-209ENST00000525840 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
CHID1-209ENST00000525840 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
CHID1-209ENST00000525840 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
CHID1-209ENST00000525840 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
CHID1-209ENST00000525840 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
CHID1-209ENST00000525840 ERICH3Q5RHP9 1530 aa16.06■□□□□ 0.16
CHID1-209ENST00000525840 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
CHID1-209ENST00000525840 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
CHID1-209ENST00000525840 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
CHID1-209ENST00000525840 CHD1O14646 1710 aa16.04■□□□□ 0.16
CHID1-209ENST00000525840 DNAJC5Q9H3Z4 198 aa16.02■□□□□ 0.16
CHID1-209ENST00000525840 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
CHID1-209ENST00000525840 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CHID1-209ENST00000525840 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
CHID1-209ENST00000525840 CUL7Q14999 1698 aa15.98■□□□□ 0.15
CHID1-209ENST00000525840 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
CHID1-209ENST00000525840 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
CHID1-209ENST00000525840 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
CHID1-209ENST00000525840 IGF1RP08069 1367 aa15.9■□□□□ 0.14
CHID1-209ENST00000525840 EEA1Q15075 1411 aa15.87■□□□□ 0.13
CHID1-209ENST00000525840 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
CHID1-209ENST00000525840 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
CHID1-209ENST00000525840 NUP160Q12769 1436 aa15.82■□□□□ 0.12
CHID1-209ENST00000525840 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
CHID1-209ENST00000525840 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
CHID1-209ENST00000525840 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
CHID1-209ENST00000525840 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
CHID1-209ENST00000525840 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
CHID1-209ENST00000525840 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
CHID1-209ENST00000525840 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
CHID1-209ENST00000525840 ARHGEF11O15085 1522 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms