RNA–Protein interactions for RNA: ENST00000525798.1

PACS1-204, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-204ENST00000525798 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
PACS1-204ENST00000525798 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
PACS1-204ENST00000525798 ABCC9O60706 1549 aa23.49■■□□□ 1.35
PACS1-204ENST00000525798 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
PACS1-204ENST00000525798 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
PACS1-204ENST00000525798 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
PACS1-204ENST00000525798 NACADO15069 1562 aa22.7■■□□□ 1.22
PACS1-204ENST00000525798 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
PACS1-204ENST00000525798 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
PACS1-204ENST00000525798 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
PACS1-204ENST00000525798 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
PACS1-204ENST00000525798 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.13
PACS1-204ENST00000525798 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
PACS1-204ENST00000525798 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
PACS1-204ENST00000525798 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
PACS1-204ENST00000525798 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
PACS1-204ENST00000525798 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
PACS1-204ENST00000525798 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
PACS1-204ENST00000525798 BAZ1AQ9NRL2 1556 aaPredicted RBP21.28■■□□□ 1
PACS1-204ENST00000525798 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
PACS1-204ENST00000525798 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
PACS1-204ENST00000525798 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
PACS1-204ENST00000525798 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
PACS1-204ENST00000525798 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
PACS1-204ENST00000525798 WIZO95785 1651 aa21.02■□□□□ 0.96
PACS1-204ENST00000525798 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
PACS1-204ENST00000525798 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
PACS1-204ENST00000525798 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
PACS1-204ENST00000525798 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
PACS1-204ENST00000525798 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
PACS1-204ENST00000525798 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
PACS1-204ENST00000525798 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
PACS1-204ENST00000525798 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
PACS1-204ENST00000525798 NESP48681 1621 aa20.45■□□□□ 0.86
PACS1-204ENST00000525798 CFTRP13569 1480 aa20.4■□□□□ 0.86
PACS1-204ENST00000525798 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
PACS1-204ENST00000525798 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
PACS1-204ENST00000525798 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
PACS1-204ENST00000525798 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
PACS1-204ENST00000525798 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
PACS1-204ENST00000525798 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
PACS1-204ENST00000525798 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
PACS1-204ENST00000525798 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
PACS1-204ENST00000525798 PRDM2Q13029 1718 aa20■□□□□ 0.79
PACS1-204ENST00000525798 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
PACS1-204ENST00000525798 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
PACS1-204ENST00000525798 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
PACS1-204ENST00000525798 CUX1P39880 1505 aa19.94■□□□□ 0.78
PACS1-204ENST00000525798 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
PACS1-204ENST00000525798 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
PACS1-204ENST00000525798 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
PACS1-204ENST00000525798 WDR62O43379 1518 aa19.88■□□□□ 0.77
PACS1-204ENST00000525798 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
PACS1-204ENST00000525798 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
PACS1-204ENST00000525798 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
PACS1-204ENST00000525798 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
PACS1-204ENST00000525798 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
PACS1-204ENST00000525798 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
PACS1-204ENST00000525798 SOGA1O94964 1423 aa19.76■□□□□ 0.75
PACS1-204ENST00000525798 CUX2O14529 1486 aa19.76■□□□□ 0.75
PACS1-204ENST00000525798 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
PACS1-204ENST00000525798 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
PACS1-204ENST00000525798 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
PACS1-204ENST00000525798 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
PACS1-204ENST00000525798 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
PACS1-204ENST00000525798 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
PACS1-204ENST00000525798 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.733e-7■■■■□ 19.7
PACS1-204ENST00000525798 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
PACS1-204ENST00000525798 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
PACS1-204ENST00000525798 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
PACS1-204ENST00000525798 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
PACS1-204ENST00000525798 IGF1RP08069 1367 aa19.46■□□□□ 0.71
PACS1-204ENST00000525798 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
PACS1-204ENST00000525798 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
PACS1-204ENST00000525798 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
PACS1-204ENST00000525798 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
PACS1-204ENST00000525798 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
PACS1-204ENST00000525798 EEA1Q15075 1411 aa19.38■□□□□ 0.69
PACS1-204ENST00000525798 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
PACS1-204ENST00000525798 FBLN2P98095 1184 aa19.34■□□□□ 0.69
PACS1-204ENST00000525798 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
PACS1-204ENST00000525798 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
PACS1-204ENST00000525798 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
PACS1-204ENST00000525798 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
PACS1-204ENST00000525798 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
PACS1-204ENST00000525798 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
PACS1-204ENST00000525798 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
PACS1-204ENST00000525798 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
PACS1-204ENST00000525798 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
PACS1-204ENST00000525798 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
PACS1-204ENST00000525798 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
PACS1-204ENST00000525798 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
PACS1-204ENST00000525798 CUL7Q14999 1698 aa19.17■□□□□ 0.66
PACS1-204ENST00000525798 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
PACS1-204ENST00000525798 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
PACS1-204ENST00000525798 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
PACS1-204ENST00000525798 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
PACS1-204ENST00000525798 KIF21BO75037 1637 aa19.1■□□□□ 0.65
PACS1-204ENST00000525798 NUP160Q12769 1436 aa19.08■□□□□ 0.64
PACS1-204ENST00000525798 CHD1O14646 1710 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms