RNA–Protein interactions for RNA: ENST00000525733.5

CTSF-203, Transcript of cathepsin F, humanhuman

TSL 3

Gene CTSF, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-203ENST00000525733 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
CTSF-203ENST00000525733 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CTSF-203ENST00000525733 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.62
CTSF-203ENST00000525733 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
CTSF-203ENST00000525733 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.5
CTSF-203ENST00000525733 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
CTSF-203ENST00000525733 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
CTSF-203ENST00000525733 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
CTSF-203ENST00000525733 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
CTSF-203ENST00000525733 NACADO15069 1562 aa17.73■□□□□ 0.43
CTSF-203ENST00000525733 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
CTSF-203ENST00000525733 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
CTSF-203ENST00000525733 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTSF-203ENST00000525733 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
CTSF-203ENST00000525733 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
CTSF-203ENST00000525733 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
CTSF-203ENST00000525733 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
CTSF-203ENST00000525733 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
CTSF-203ENST00000525733 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
CTSF-203ENST00000525733 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
CTSF-203ENST00000525733 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
CTSF-203ENST00000525733 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
CTSF-203ENST00000525733 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
CTSF-203ENST00000525733 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
CTSF-203ENST00000525733 WIZO95785 1651 aa16.53■□□□□ 0.24
CTSF-203ENST00000525733 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
CTSF-203ENST00000525733 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
CTSF-203ENST00000525733 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
CTSF-203ENST00000525733 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
CTSF-203ENST00000525733 CUX2O14529 1486 aa16.39■□□□□ 0.21
CTSF-203ENST00000525733 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
CTSF-203ENST00000525733 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
CTSF-203ENST00000525733 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
CTSF-203ENST00000525733 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
CTSF-203ENST00000525733 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
CTSF-203ENST00000525733 NESP48681 1621 aa16.22■□□□□ 0.19
CTSF-203ENST00000525733 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
CTSF-203ENST00000525733 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
CTSF-203ENST00000525733 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
CTSF-203ENST00000525733 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
CTSF-203ENST00000525733 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CTSF-203ENST00000525733 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
CTSF-203ENST00000525733 CFTRP13569 1480 aa15.94■□□□□ 0.14
CTSF-203ENST00000525733 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
CTSF-203ENST00000525733 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
CTSF-203ENST00000525733 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
CTSF-203ENST00000525733 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
CTSF-203ENST00000525733 WDR62O43379 1518 aa15.78■□□□□ 0.12
CTSF-203ENST00000525733 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
CTSF-203ENST00000525733 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
CTSF-203ENST00000525733 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
CTSF-203ENST00000525733 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
CTSF-203ENST00000525733 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CTSF-203ENST00000525733 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
CTSF-203ENST00000525733 CUX1P39880 1505 aa15.63■□□□□ 0.09
CTSF-203ENST00000525733 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
CTSF-203ENST00000525733 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
CTSF-203ENST00000525733 EEA1Q15075 1411 aa15.59■□□□□ 0.09
CTSF-203ENST00000525733 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
CTSF-203ENST00000525733 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
CTSF-203ENST00000525733 SOGA1O94964 1423 aa15.56■□□□□ 0.08
CTSF-203ENST00000525733 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
CTSF-203ENST00000525733 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
CTSF-203ENST00000525733 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
CTSF-203ENST00000525733 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
CTSF-203ENST00000525733 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
CTSF-203ENST00000525733 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
CTSF-203ENST00000525733 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.07
CTSF-203ENST00000525733 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
CTSF-203ENST00000525733 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
CTSF-203ENST00000525733 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
CTSF-203ENST00000525733 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
CTSF-203ENST00000525733 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
CTSF-203ENST00000525733 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
CTSF-203ENST00000525733 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
CTSF-203ENST00000525733 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
CTSF-203ENST00000525733 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
CTSF-203ENST00000525733 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
CTSF-203ENST00000525733 CHD1O14646 1710 aa15.35■□□□□ 0.05
CTSF-203ENST00000525733 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
CTSF-203ENST00000525733 IGF1RP08069 1367 aa15.34■□□□□ 0.05
CTSF-203ENST00000525733 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
CTSF-203ENST00000525733 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
CTSF-203ENST00000525733 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
CTSF-203ENST00000525733 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
CTSF-203ENST00000525733 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
CTSF-203ENST00000525733 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
CTSF-203ENST00000525733 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
CTSF-203ENST00000525733 KIF21BO75037 1637 aa15.28■□□□□ 0.04
CTSF-203ENST00000525733 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
CTSF-203ENST00000525733 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
CTSF-203ENST00000525733 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
CTSF-203ENST00000525733 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
CTSF-203ENST00000525733 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
CTSF-203ENST00000525733 FBLN2P98095 1184 aa15.22■□□□□ 0.03
CTSF-203ENST00000525733 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
CTSF-203ENST00000525733 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
CTSF-203ENST00000525733 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
CTSF-203ENST00000525733 GRIN2BQ13224 1484 aa15.17■□□□□ 0.02
CTSF-203ENST00000525733 CUL7Q14999 1698 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms