RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
PABPC4-220ENST00000525669 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
PABPC4-220ENST00000525669 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
PABPC4-220ENST00000525669 ABCC9O60706 1549 aa16.72■□□□□ 0.27
PABPC4-220ENST00000525669 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
PABPC4-220ENST00000525669 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
PABPC4-220ENST00000525669 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
PABPC4-220ENST00000525669 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
PABPC4-220ENST00000525669 NACADO15069 1562 aa16.34■□□□□ 0.21
PABPC4-220ENST00000525669 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
PABPC4-220ENST00000525669 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
PABPC4-220ENST00000525669 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
PABPC4-220ENST00000525669 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
PABPC4-220ENST00000525669 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
PABPC4-220ENST00000525669 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
PABPC4-220ENST00000525669 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
PABPC4-220ENST00000525669 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
PABPC4-220ENST00000525669 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
PABPC4-220ENST00000525669 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
PABPC4-220ENST00000525669 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
PABPC4-220ENST00000525669 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
PABPC4-220ENST00000525669 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
PABPC4-220ENST00000525669 WIZO95785 1651 aa15.48■□□□□ 0.07
PABPC4-220ENST00000525669 EIF4G1Q04637 1599 aaKnown RBP15.31■□□□□ 0.04
PABPC4-220ENST00000525669 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
PABPC4-220ENST00000525669 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
PABPC4-220ENST00000525669 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
PABPC4-220ENST00000525669 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
PABPC4-220ENST00000525669 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
PABPC4-220ENST00000525669 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
PABPC4-220ENST00000525669 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
PABPC4-220ENST00000525669 HMGXB3Q12766 1538 aa15.06■□□□□ 0
PABPC4-220ENST00000525669 NCAPD3P42695 1498 aa15.04■□□□□ -0
PABPC4-220ENST00000525669 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
PABPC4-220ENST00000525669 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
PABPC4-220ENST00000525669 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
PABPC4-220ENST00000525669 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
PABPC4-220ENST00000525669 CFTRP13569 1480 aa14.7□□□□□ -0.06
PABPC4-220ENST00000525669 NESP48681 1621 aa14.67□□□□□ -0.06
PABPC4-220ENST00000525669 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
PABPC4-220ENST00000525669 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
PABPC4-220ENST00000525669 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
PABPC4-220ENST00000525669 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
PABPC4-220ENST00000525669 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
PABPC4-220ENST00000525669 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
PABPC4-220ENST00000525669 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
PABPC4-220ENST00000525669 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
PABPC4-220ENST00000525669 CUX1P39880 1505 aa14.54□□□□□ -0.08
PABPC4-220ENST00000525669 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
PABPC4-220ENST00000525669 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
PABPC4-220ENST00000525669 SOGA1O94964 1423 aa14.44□□□□□ -0.1
PABPC4-220ENST00000525669 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
PABPC4-220ENST00000525669 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
PABPC4-220ENST00000525669 DNMBPQ6XZF7 1577 aa14.42□□□□□ -0.1
PABPC4-220ENST00000525669 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
PABPC4-220ENST00000525669 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
PABPC4-220ENST00000525669 TOPBP1Q92547 1522 aa14.4□□□□□ -0.1
PABPC4-220ENST00000525669 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
PABPC4-220ENST00000525669 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
PABPC4-220ENST00000525669 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
PABPC4-220ENST00000525669 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
PABPC4-220ENST00000525669 EEA1Q15075 1411 aa14.3□□□□□ -0.12
PABPC4-220ENST00000525669 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
PABPC4-220ENST00000525669 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
PABPC4-220ENST00000525669 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
PABPC4-220ENST00000525669 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
PABPC4-220ENST00000525669 CSRNP3Q8WYN3 585 aa14.26□□□□□ -0.13
PABPC4-220ENST00000525669 CUX2O14529 1486 aa14.25□□□□□ -0.13
PABPC4-220ENST00000525669 WDR62O43379 1518 aa14.25□□□□□ -0.13
PABPC4-220ENST00000525669 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
PABPC4-220ENST00000525669 KIF21BO75037 1637 aa14.22□□□□□ -0.13
PABPC4-220ENST00000525669 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
PABPC4-220ENST00000525669 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
PABPC4-220ENST00000525669 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
PABPC4-220ENST00000525669 GOLGA3Q08378 1498 aa14.16□□□□□ -0.14
PABPC4-220ENST00000525669 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
PABPC4-220ENST00000525669 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
PABPC4-220ENST00000525669 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
PABPC4-220ENST00000525669 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
PABPC4-220ENST00000525669 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
PABPC4-220ENST00000525669 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
PABPC4-220ENST00000525669 IGF1RP08069 1367 aa14.1□□□□□ -0.15
PABPC4-220ENST00000525669 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
PABPC4-220ENST00000525669 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
PABPC4-220ENST00000525669 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
PABPC4-220ENST00000525669 CUL7Q14999 1698 aa14.08□□□□□ -0.16
PABPC4-220ENST00000525669 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
PABPC4-220ENST00000525669 AQRO60306 1485 aaKnown RBP eCLIP14.07□□□□□ -0.169e-7■■■■□ 24.4
PABPC4-220ENST00000525669 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
PABPC4-220ENST00000525669 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
PABPC4-220ENST00000525669 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
PABPC4-220ENST00000525669 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
PABPC4-220ENST00000525669 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
PABPC4-220ENST00000525669 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
PABPC4-220ENST00000525669 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
PABPC4-220ENST00000525669 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
PABPC4-220ENST00000525669 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
PABPC4-220ENST00000525669 SNAPC4Q5SXM2 1469 aa13.94□□□□□ -0.18
PABPC4-220ENST00000525669 CLIP1P30622 1438 aa13.93□□□□□ -0.18
PABPC4-220ENST00000525669 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms