RNA–Protein interactions for RNA: ENST00000525148.1

NPAS4-203, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 1 (best)

Gene NPAS4, Length 2,454 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-203ENST00000525148 NISCHQ9Y2I1 1504 aa37.08■■■■□ 3.53
NPAS4-203ENST00000525148 CCDC180Q9P1Z9 1646 aa31.75■■■□□ 2.67
NPAS4-203ENST00000525148 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
NPAS4-203ENST00000525148 SHROOM4Q9ULL8 1493 aa31.18■■■□□ 2.58
NPAS4-203ENST00000525148 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
NPAS4-203ENST00000525148 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
NPAS4-203ENST00000525148 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
NPAS4-203ENST00000525148 ABCC9O60706 1549 aa29.86■■■□□ 2.37
NPAS4-203ENST00000525148 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
NPAS4-203ENST00000525148 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
NPAS4-203ENST00000525148 NACADO15069 1562 aa29.48■■■□□ 2.31
NPAS4-203ENST00000525148 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
NPAS4-203ENST00000525148 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
NPAS4-203ENST00000525148 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
NPAS4-203ENST00000525148 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
NPAS4-203ENST00000525148 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
NPAS4-203ENST00000525148 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
NPAS4-203ENST00000525148 WIZO95785 1651 aa28.62■■■□□ 2.17
NPAS4-203ENST00000525148 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
NPAS4-203ENST00000525148 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.15
NPAS4-203ENST00000525148 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
NPAS4-203ENST00000525148 LOC105371045A0A1W2PR82 267 aa28.37■■■□□ 2.13
NPAS4-203ENST00000525148 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
NPAS4-203ENST00000525148 TRIM41Q8WV44 630 aa28.26■■■□□ 2.11
NPAS4-203ENST00000525148 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
NPAS4-203ENST00000525148 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
NPAS4-203ENST00000525148 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
NPAS4-203ENST00000525148 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
NPAS4-203ENST00000525148 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
NPAS4-203ENST00000525148 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
NPAS4-203ENST00000525148 EHMT2Q96KQ7 1210 aa27.79■■■□□ 2.04
NPAS4-203ENST00000525148 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
NPAS4-203ENST00000525148 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
NPAS4-203ENST00000525148 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
NPAS4-203ENST00000525148 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
NPAS4-203ENST00000525148 SOGA1O94964 1423 aa27.43■■□□□ 1.98
NPAS4-203ENST00000525148 HRCP23327 699 aa27.39■■□□□ 1.98
NPAS4-203ENST00000525148 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
NPAS4-203ENST00000525148 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
NPAS4-203ENST00000525148 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
NPAS4-203ENST00000525148 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
NPAS4-203ENST00000525148 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
NPAS4-203ENST00000525148 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
NPAS4-203ENST00000525148 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
NPAS4-203ENST00000525148 EEA1Q15075 1411 aa27.13■■□□□ 1.93
NPAS4-203ENST00000525148 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
NPAS4-203ENST00000525148 CEP162Q5TB80 1403 aa27.01■■□□□ 1.92
NPAS4-203ENST00000525148 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
NPAS4-203ENST00000525148 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
NPAS4-203ENST00000525148 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
NPAS4-203ENST00000525148 GOLGA3Q08378 1498 aa26.94■■□□□ 1.9
NPAS4-203ENST00000525148 CFTRP13569 1480 aa26.94■■□□□ 1.9
NPAS4-203ENST00000525148 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
NPAS4-203ENST00000525148 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
NPAS4-203ENST00000525148 CUX1P39880 1505 aa26.86■■□□□ 1.89
NPAS4-203ENST00000525148 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
NPAS4-203ENST00000525148 KIF21BO75037 1637 aa26.83■■□□□ 1.89
NPAS4-203ENST00000525148 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
NPAS4-203ENST00000525148 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
NPAS4-203ENST00000525148 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
NPAS4-203ENST00000525148 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
NPAS4-203ENST00000525148 CLIP1P30622 1438 aa26.62■■□□□ 1.85
NPAS4-203ENST00000525148 RANGAP1P46060 587 aaPredicted RBP26.6■■□□□ 1.85
NPAS4-203ENST00000525148 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
NPAS4-203ENST00000525148 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
NPAS4-203ENST00000525148 NESP48681 1621 aa26.49■■□□□ 1.83
NPAS4-203ENST00000525148 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
NPAS4-203ENST00000525148 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
NPAS4-203ENST00000525148 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.83
NPAS4-203ENST00000525148 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
NPAS4-203ENST00000525148 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
NPAS4-203ENST00000525148 CUX2O14529 1486 aa26.43■■□□□ 1.82
NPAS4-203ENST00000525148 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
NPAS4-203ENST00000525148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
NPAS4-203ENST00000525148 IGF1RP08069 1367 aa26.36■■□□□ 1.81
NPAS4-203ENST00000525148 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
NPAS4-203ENST00000525148 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
NPAS4-203ENST00000525148 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
NPAS4-203ENST00000525148 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
NPAS4-203ENST00000525148 CCER1Q8TC90 406 aaPredicted RBP26.23■■□□□ 1.79
NPAS4-203ENST00000525148 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
NPAS4-203ENST00000525148 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.78
NPAS4-203ENST00000525148 APLP2Q06481 763 aa26.19■■□□□ 1.78
NPAS4-203ENST00000525148 LAMC3Q9Y6N6 1575 aa26.19■■□□□ 1.78
NPAS4-203ENST00000525148 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
NPAS4-203ENST00000525148 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
NPAS4-203ENST00000525148 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
NPAS4-203ENST00000525148 KANK4Q5T7N3 995 aaPredicted RBP26.09■■□□□ 1.77
NPAS4-203ENST00000525148 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
NPAS4-203ENST00000525148 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
NPAS4-203ENST00000525148 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
NPAS4-203ENST00000525148 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
NPAS4-203ENST00000525148 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
NPAS4-203ENST00000525148 P3H3Q8IVL6 736 aa25.9■■□□□ 1.74
NPAS4-203ENST00000525148 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
NPAS4-203ENST00000525148 CUL7Q14999 1698 aa25.85■■□□□ 1.73
NPAS4-203ENST00000525148 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
NPAS4-203ENST00000525148 FHOD3Q2V2M9 1422 aa25.78■■□□□ 1.72
NPAS4-203ENST00000525148 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
NPAS4-203ENST00000525148 RRBP1Q9P2E9 1410 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms