RNA–Protein interactions for RNA: ENST00000524953.1

TKFC-203, Transcript of triokinase and FMN cyclase, humanhuman

TSL 2

Gene TKFC, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-203ENST00000524953 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
TKFC-203ENST00000524953 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
TKFC-203ENST00000524953 ABCC9O60706 1549 aa24.18■■□□□ 1.46
TKFC-203ENST00000524953 NACADO15069 1562 aa23.38■■□□□ 1.33
TKFC-203ENST00000524953 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
TKFC-203ENST00000524953 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
TKFC-203ENST00000524953 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
TKFC-203ENST00000524953 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
TKFC-203ENST00000524953 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
TKFC-203ENST00000524953 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
TKFC-203ENST00000524953 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
TKFC-203ENST00000524953 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
TKFC-203ENST00000524953 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
TKFC-203ENST00000524953 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
TKFC-203ENST00000524953 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
TKFC-203ENST00000524953 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
TKFC-203ENST00000524953 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
TKFC-203ENST00000524953 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
TKFC-203ENST00000524953 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
TKFC-203ENST00000524953 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
TKFC-203ENST00000524953 SMARCA2P51531 1590 aa21.58■■□□□ 1.05
TKFC-203ENST00000524953 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
TKFC-203ENST00000524953 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
TKFC-203ENST00000524953 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
TKFC-203ENST00000524953 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
TKFC-203ENST00000524953 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
TKFC-203ENST00000524953 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
TKFC-203ENST00000524953 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
TKFC-203ENST00000524953 WIZO95785 1651 aa21.23■□□□□ 0.99
TKFC-203ENST00000524953 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
TKFC-203ENST00000524953 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
TKFC-203ENST00000524953 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
TKFC-203ENST00000524953 NESP48681 1621 aa20.91■□□□□ 0.94
TKFC-203ENST00000524953 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
TKFC-203ENST00000524953 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
TKFC-203ENST00000524953 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
TKFC-203ENST00000524953 CFTRP13569 1480 aa20.81■□□□□ 0.92
TKFC-203ENST00000524953 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
TKFC-203ENST00000524953 CUX2O14529 1486 aa20.69■□□□□ 0.9
TKFC-203ENST00000524953 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
TKFC-203ENST00000524953 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
TKFC-203ENST00000524953 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
TKFC-203ENST00000524953 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
TKFC-203ENST00000524953 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
TKFC-203ENST00000524953 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
TKFC-203ENST00000524953 WDR62O43379 1518 aa20.54■□□□□ 0.88
TKFC-203ENST00000524953 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
TKFC-203ENST00000524953 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
TKFC-203ENST00000524953 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
TKFC-203ENST00000524953 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
TKFC-203ENST00000524953 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
TKFC-203ENST00000524953 CUX1P39880 1505 aa20.18■□□□□ 0.82
TKFC-203ENST00000524953 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
TKFC-203ENST00000524953 FGD5Q6ZNL6 1462 aa20.12■□□□□ 0.81
TKFC-203ENST00000524953 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
TKFC-203ENST00000524953 SOGA1O94964 1423 aa20.1■□□□□ 0.81
TKFC-203ENST00000524953 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
TKFC-203ENST00000524953 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
TKFC-203ENST00000524953 ZNF608Q9ULD9 1512 aaPredicted RBP20.05■□□□□ 0.8
TKFC-203ENST00000524953 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
TKFC-203ENST00000524953 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
TKFC-203ENST00000524953 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
TKFC-203ENST00000524953 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
TKFC-203ENST00000524953 SYNJ1O43426 1573 aa20■□□□□ 0.79
TKFC-203ENST00000524953 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
TKFC-203ENST00000524953 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.784e-11■■■■■ 31.4
TKFC-203ENST00000524953 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
TKFC-203ENST00000524953 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
TKFC-203ENST00000524953 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
TKFC-203ENST00000524953 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
TKFC-203ENST00000524953 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
TKFC-203ENST00000524953 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
TKFC-203ENST00000524953 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
TKFC-203ENST00000524953 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
TKFC-203ENST00000524953 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
TKFC-203ENST00000524953 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
TKFC-203ENST00000524953 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
TKFC-203ENST00000524953 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
TKFC-203ENST00000524953 FBLN2P98095 1184 aa19.72■□□□□ 0.75
TKFC-203ENST00000524953 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
TKFC-203ENST00000524953 CHD1O14646 1710 aa19.68■□□□□ 0.74
TKFC-203ENST00000524953 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
TKFC-203ENST00000524953 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
TKFC-203ENST00000524953 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
TKFC-203ENST00000524953 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
TKFC-203ENST00000524953 IGF1RP08069 1367 aa19.58■□□□□ 0.73
TKFC-203ENST00000524953 CUL7Q14999 1698 aa19.56■□□□□ 0.72
TKFC-203ENST00000524953 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
TKFC-203ENST00000524953 NUP160Q12769 1436 aa19.53■□□□□ 0.72
TKFC-203ENST00000524953 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
TKFC-203ENST00000524953 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
TKFC-203ENST00000524953 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
TKFC-203ENST00000524953 EEA1Q15075 1411 aa19.43■□□□□ 0.7
TKFC-203ENST00000524953 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
TKFC-203ENST00000524953 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
TKFC-203ENST00000524953 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
TKFC-203ENST00000524953 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
TKFC-203ENST00000524953 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
TKFC-203ENST00000524953 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
TKFC-203ENST00000524953 KIAA0586Q9BVV6 1533 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms