RNA–Protein interactions for RNA: ENST00000524898.1

FAM220A-202, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 3

Gene FAM220A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-202ENST00000524898 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
FAM220A-202ENST00000524898 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
FAM220A-202ENST00000524898 ABCC9O60706 1549 aa27.6■■■□□ 2.01
FAM220A-202ENST00000524898 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
FAM220A-202ENST00000524898 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
FAM220A-202ENST00000524898 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
FAM220A-202ENST00000524898 NACADO15069 1562 aa26.79■■□□□ 1.88
FAM220A-202ENST00000524898 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
FAM220A-202ENST00000524898 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
FAM220A-202ENST00000524898 SCRIBQ14160 1630 aa26.14■■□□□ 1.77
FAM220A-202ENST00000524898 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
FAM220A-202ENST00000524898 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
FAM220A-202ENST00000524898 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
FAM220A-202ENST00000524898 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
FAM220A-202ENST00000524898 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
FAM220A-202ENST00000524898 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
FAM220A-202ENST00000524898 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
FAM220A-202ENST00000524898 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
FAM220A-202ENST00000524898 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
FAM220A-202ENST00000524898 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
FAM220A-202ENST00000524898 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
FAM220A-202ENST00000524898 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
FAM220A-202ENST00000524898 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
FAM220A-202ENST00000524898 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
FAM220A-202ENST00000524898 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
FAM220A-202ENST00000524898 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
FAM220A-202ENST00000524898 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
FAM220A-202ENST00000524898 WIZO95785 1651 aa24.72■■□□□ 1.55
FAM220A-202ENST00000524898 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
FAM220A-202ENST00000524898 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
FAM220A-202ENST00000524898 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
FAM220A-202ENST00000524898 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
FAM220A-202ENST00000524898 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
FAM220A-202ENST00000524898 NESP48681 1621 aa23.99■■□□□ 1.43
FAM220A-202ENST00000524898 CFTRP13569 1480 aa23.98■■□□□ 1.43
FAM220A-202ENST00000524898 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
FAM220A-202ENST00000524898 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
FAM220A-202ENST00000524898 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
FAM220A-202ENST00000524898 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
FAM220A-202ENST00000524898 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
FAM220A-202ENST00000524898 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
FAM220A-202ENST00000524898 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
FAM220A-202ENST00000524898 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
FAM220A-202ENST00000524898 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
FAM220A-202ENST00000524898 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
FAM220A-202ENST00000524898 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
FAM220A-202ENST00000524898 THOC2Q8NI27 1593 aaKnown RBP23.45■■□□□ 1.34
FAM220A-202ENST00000524898 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
FAM220A-202ENST00000524898 DNMBPQ6XZF7 1577 aa23.42■■□□□ 1.34
FAM220A-202ENST00000524898 WDR62O43379 1518 aa23.42■■□□□ 1.34
FAM220A-202ENST00000524898 CUX1P39880 1505 aa23.4■■□□□ 1.34
FAM220A-202ENST00000524898 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
FAM220A-202ENST00000524898 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
FAM220A-202ENST00000524898 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
FAM220A-202ENST00000524898 CUX2O14529 1486 aa23.3■■□□□ 1.32
FAM220A-202ENST00000524898 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
FAM220A-202ENST00000524898 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
FAM220A-202ENST00000524898 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
FAM220A-202ENST00000524898 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
FAM220A-202ENST00000524898 SOGA1O94964 1423 aa23.24■■□□□ 1.31
FAM220A-202ENST00000524898 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
FAM220A-202ENST00000524898 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
FAM220A-202ENST00000524898 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.29
FAM220A-202ENST00000524898 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
FAM220A-202ENST00000524898 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
FAM220A-202ENST00000524898 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
FAM220A-202ENST00000524898 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.27
FAM220A-202ENST00000524898 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
FAM220A-202ENST00000524898 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
FAM220A-202ENST00000524898 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
FAM220A-202ENST00000524898 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
FAM220A-202ENST00000524898 GRIN2BQ13224 1484 aa22.88■■□□□ 1.25
FAM220A-202ENST00000524898 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
FAM220A-202ENST00000524898 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
FAM220A-202ENST00000524898 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
FAM220A-202ENST00000524898 EEA1Q15075 1411 aa22.83■■□□□ 1.25
FAM220A-202ENST00000524898 IGF1RP08069 1367 aa22.82■■□□□ 1.24
FAM220A-202ENST00000524898 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
FAM220A-202ENST00000524898 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
FAM220A-202ENST00000524898 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
FAM220A-202ENST00000524898 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
FAM220A-202ENST00000524898 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
FAM220A-202ENST00000524898 FBLN2P98095 1184 aa22.73■■□□□ 1.23
FAM220A-202ENST00000524898 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
FAM220A-202ENST00000524898 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
FAM220A-202ENST00000524898 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
FAM220A-202ENST00000524898 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
FAM220A-202ENST00000524898 CUL7Q14999 1698 aa22.65■■□□□ 1.22
FAM220A-202ENST00000524898 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
FAM220A-202ENST00000524898 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
FAM220A-202ENST00000524898 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
FAM220A-202ENST00000524898 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
FAM220A-202ENST00000524898 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
FAM220A-202ENST00000524898 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
FAM220A-202ENST00000524898 CHD1O14646 1710 aa22.51■■□□□ 1.19
FAM220A-202ENST00000524898 KIF21BO75037 1637 aa22.49■■□□□ 1.19
FAM220A-202ENST00000524898 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
FAM220A-202ENST00000524898 GOLGA3Q08378 1498 aa22.46■■□□□ 1.19
FAM220A-202ENST00000524898 NUP160Q12769 1436 aa22.42■■□□□ 1.18
FAM220A-202ENST00000524898 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms