RNA–Protein interactions for RNA: ENST00000524873.1

SORL1-203, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-203ENST00000524873 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
SORL1-203ENST00000524873 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
SORL1-203ENST00000524873 ABCC9O60706 1549 aa23.01■■□□□ 1.27
SORL1-203ENST00000524873 NACADO15069 1562 aa22.27■■□□□ 1.16
SORL1-203ENST00000524873 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
SORL1-203ENST00000524873 ZCCHC6Q5VYS8 1495 aaKnown RBP22.24■■□□□ 1.15
SORL1-203ENST00000524873 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
SORL1-203ENST00000524873 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
SORL1-203ENST00000524873 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
SORL1-203ENST00000524873 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
SORL1-203ENST00000524873 SCRIBQ14160 1630 aa21.58■■□□□ 1.05
SORL1-203ENST00000524873 BICRAQ9NZM4 1560 aa21.52■■□□□ 1.04
SORL1-203ENST00000524873 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
SORL1-203ENST00000524873 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
SORL1-203ENST00000524873 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
SORL1-203ENST00000524873 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
SORL1-203ENST00000524873 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
SORL1-203ENST00000524873 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
SORL1-203ENST00000524873 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
SORL1-203ENST00000524873 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
SORL1-203ENST00000524873 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
SORL1-203ENST00000524873 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
SORL1-203ENST00000524873 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
SORL1-203ENST00000524873 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
SORL1-203ENST00000524873 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
SORL1-203ENST00000524873 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
SORL1-203ENST00000524873 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
SORL1-203ENST00000524873 WIZO95785 1651 aa20.35■□□□□ 0.85
SORL1-203ENST00000524873 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
SORL1-203ENST00000524873 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
SORL1-203ENST00000524873 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
SORL1-203ENST00000524873 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
SORL1-203ENST00000524873 NESP48681 1621 aa19.92■□□□□ 0.78
SORL1-203ENST00000524873 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
SORL1-203ENST00000524873 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
SORL1-203ENST00000524873 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
SORL1-203ENST00000524873 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
SORL1-203ENST00000524873 CFTRP13569 1480 aa19.82■□□□□ 0.76
SORL1-203ENST00000524873 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
SORL1-203ENST00000524873 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
SORL1-203ENST00000524873 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
SORL1-203ENST00000524873 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
SORL1-203ENST00000524873 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
SORL1-203ENST00000524873 CUX2O14529 1486 aa19.62■□□□□ 0.73
SORL1-203ENST00000524873 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
SORL1-203ENST00000524873 WDR62O43379 1518 aa19.53■□□□□ 0.72
SORL1-203ENST00000524873 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
SORL1-203ENST00000524873 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
SORL1-203ENST00000524873 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
SORL1-203ENST00000524873 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
SORL1-203ENST00000524873 CUX1P39880 1505 aa19.25■□□□□ 0.67
SORL1-203ENST00000524873 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
SORL1-203ENST00000524873 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
SORL1-203ENST00000524873 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
SORL1-203ENST00000524873 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
SORL1-203ENST00000524873 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
SORL1-203ENST00000524873 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
SORL1-203ENST00000524873 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
SORL1-203ENST00000524873 SOGA1O94964 1423 aa19.16■□□□□ 0.66
SORL1-203ENST00000524873 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
SORL1-203ENST00000524873 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
SORL1-203ENST00000524873 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
SORL1-203ENST00000524873 ZNF608Q9ULD9 1512 aaPredicted RBP19.09■□□□□ 0.65
SORL1-203ENST00000524873 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
SORL1-203ENST00000524873 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
SORL1-203ENST00000524873 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
SORL1-203ENST00000524873 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
SORL1-203ENST00000524873 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
SORL1-203ENST00000524873 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
SORL1-203ENST00000524873 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
SORL1-203ENST00000524873 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
SORL1-203ENST00000524873 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
SORL1-203ENST00000524873 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
SORL1-203ENST00000524873 SNAPC4Q5SXM2 1469 aa18.85■□□□□ 0.61
SORL1-203ENST00000524873 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
SORL1-203ENST00000524873 DNAJC5Q9H3Z4 198 aa18.83■□□□□ 0.6
SORL1-203ENST00000524873 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SORL1-203ENST00000524873 CHD1O14646 1710 aa18.83■□□□□ 0.6
SORL1-203ENST00000524873 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
SORL1-203ENST00000524873 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
SORL1-203ENST00000524873 FBLN2P98095 1184 aa18.79■□□□□ 0.6
SORL1-203ENST00000524873 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
SORL1-203ENST00000524873 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
SORL1-203ENST00000524873 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
SORL1-203ENST00000524873 CUL7Q14999 1698 aa18.71■□□□□ 0.59
SORL1-203ENST00000524873 IGF1RP08069 1367 aa18.68■□□□□ 0.58
SORL1-203ENST00000524873 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
SORL1-203ENST00000524873 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
SORL1-203ENST00000524873 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
SORL1-203ENST00000524873 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
SORL1-203ENST00000524873 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
SORL1-203ENST00000524873 NUP160Q12769 1436 aa18.57■□□□□ 0.56
SORL1-203ENST00000524873 EEA1Q15075 1411 aa18.57■□□□□ 0.56
SORL1-203ENST00000524873 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
SORL1-203ENST00000524873 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
SORL1-203ENST00000524873 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
SORL1-203ENST00000524873 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
SORL1-203ENST00000524873 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
SORL1-203ENST00000524873 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
SORL1-203ENST00000524873 CSRNP3Q8WYN3 585 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms