RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
NPAS4-202ENST00000524617 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
NPAS4-202ENST00000524617 ABCC9O60706 1549 aa15.98■□□□□ 0.15
NPAS4-202ENST00000524617 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
NPAS4-202ENST00000524617 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
NPAS4-202ENST00000524617 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
NPAS4-202ENST00000524617 NACADO15069 1562 aa15.58■□□□□ 0.08
NPAS4-202ENST00000524617 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.07
NPAS4-202ENST00000524617 DCAF8L2P0C7V8 631 aa15.38■□□□□ 0.05
NPAS4-202ENST00000524617 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
NPAS4-202ENST00000524617 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
NPAS4-202ENST00000524617 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
NPAS4-202ENST00000524617 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
NPAS4-202ENST00000524617 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
NPAS4-202ENST00000524617 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
NPAS4-202ENST00000524617 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
NPAS4-202ENST00000524617 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
NPAS4-202ENST00000524617 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
NPAS4-202ENST00000524617 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
NPAS4-202ENST00000524617 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
NPAS4-202ENST00000524617 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
NPAS4-202ENST00000524617 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
NPAS4-202ENST00000524617 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
NPAS4-202ENST00000524617 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
NPAS4-202ENST00000524617 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
NPAS4-202ENST00000524617 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
NPAS4-202ENST00000524617 HMGXB3Q12766 1538 aa14.35□□□□□ -0.11
NPAS4-202ENST00000524617 WIZO95785 1651 aa14.28□□□□□ -0.12
NPAS4-202ENST00000524617 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
NPAS4-202ENST00000524617 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
NPAS4-202ENST00000524617 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
NPAS4-202ENST00000524617 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
NPAS4-202ENST00000524617 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
NPAS4-202ENST00000524617 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
NPAS4-202ENST00000524617 CFTRP13569 1480 aa13.93□□□□□ -0.18
NPAS4-202ENST00000524617 NESP48681 1621 aa13.9□□□□□ -0.18
NPAS4-202ENST00000524617 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
NPAS4-202ENST00000524617 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
NPAS4-202ENST00000524617 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
NPAS4-202ENST00000524617 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
NPAS4-202ENST00000524617 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
NPAS4-202ENST00000524617 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
NPAS4-202ENST00000524617 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
NPAS4-202ENST00000524617 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
NPAS4-202ENST00000524617 WDR62O43379 1518 aa13.67□□□□□ -0.22
NPAS4-202ENST00000524617 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
NPAS4-202ENST00000524617 CUX2O14529 1486 aa13.62□□□□□ -0.23
NPAS4-202ENST00000524617 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
NPAS4-202ENST00000524617 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
NPAS4-202ENST00000524617 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
NPAS4-202ENST00000524617 CUX1P39880 1505 aa13.55□□□□□ -0.24
NPAS4-202ENST00000524617 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
NPAS4-202ENST00000524617 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
NPAS4-202ENST00000524617 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
NPAS4-202ENST00000524617 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
NPAS4-202ENST00000524617 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
NPAS4-202ENST00000524617 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.25
NPAS4-202ENST00000524617 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
NPAS4-202ENST00000524617 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
NPAS4-202ENST00000524617 WDR97A6NE52 1622 aa13.39□□□□□ -0.27
NPAS4-202ENST00000524617 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
NPAS4-202ENST00000524617 SOGA1O94964 1423 aa13.39□□□□□ -0.27
NPAS4-202ENST00000524617 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
NPAS4-202ENST00000524617 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
NPAS4-202ENST00000524617 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
NPAS4-202ENST00000524617 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
NPAS4-202ENST00000524617 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPAS4-202ENST00000524617 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
NPAS4-202ENST00000524617 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
NPAS4-202ENST00000524617 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
NPAS4-202ENST00000524617 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
NPAS4-202ENST00000524617 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
NPAS4-202ENST00000524617 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
NPAS4-202ENST00000524617 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
NPAS4-202ENST00000524617 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
NPAS4-202ENST00000524617 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.3
NPAS4-202ENST00000524617 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
NPAS4-202ENST00000524617 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
NPAS4-202ENST00000524617 IGF1RP08069 1367 aa13.14□□□□□ -0.31
NPAS4-202ENST00000524617 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
NPAS4-202ENST00000524617 EEA1Q15075 1411 aa13.13□□□□□ -0.31
NPAS4-202ENST00000524617 CUL7Q14999 1698 aa13.13□□□□□ -0.31
NPAS4-202ENST00000524617 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
NPAS4-202ENST00000524617 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
NPAS4-202ENST00000524617 CHD1O14646 1710 aa13.08□□□□□ -0.32
NPAS4-202ENST00000524617 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
NPAS4-202ENST00000524617 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
NPAS4-202ENST00000524617 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
NPAS4-202ENST00000524617 NUP160Q12769 1436 aa13.05□□□□□ -0.32
NPAS4-202ENST00000524617 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
NPAS4-202ENST00000524617 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
NPAS4-202ENST00000524617 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
NPAS4-202ENST00000524617 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
NPAS4-202ENST00000524617 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
NPAS4-202ENST00000524617 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
NPAS4-202ENST00000524617 KIF21BO75037 1637 aa12.99□□□□□ -0.33
NPAS4-202ENST00000524617 FBLN2P98095 1184 aa12.97□□□□□ -0.33
NPAS4-202ENST00000524617 KIAA0586Q9BVV6 1533 aa12.93□□□□□ -0.34
NPAS4-202ENST00000524617 SHROOM2Q13796 1616 aa12.93□□□□□ -0.34
NPAS4-202ENST00000524617 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms