RNA–Protein interactions for RNA: ENST00000524203.1

PCM1-221, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-221ENST00000524203 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
PCM1-221ENST00000524203 ABCC9O60706 1549 aa16.11■□□□□ 0.17
PCM1-221ENST00000524203 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
PCM1-221ENST00000524203 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
PCM1-221ENST00000524203 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
PCM1-221ENST00000524203 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
PCM1-221ENST00000524203 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
PCM1-221ENST00000524203 NACADO15069 1562 aa14.68□□□□□ -0.06
PCM1-221ENST00000524203 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
PCM1-221ENST00000524203 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
PCM1-221ENST00000524203 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
PCM1-221ENST00000524203 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
PCM1-221ENST00000524203 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
PCM1-221ENST00000524203 EIF4G1Q04637 1599 aaKnown RBP14.28□□□□□ -0.12
PCM1-221ENST00000524203 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
PCM1-221ENST00000524203 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
PCM1-221ENST00000524203 CUX2O14529 1486 aa14.07□□□□□ -0.16
PCM1-221ENST00000524203 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
PCM1-221ENST00000524203 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
PCM1-221ENST00000524203 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
PCM1-221ENST00000524203 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
PCM1-221ENST00000524203 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
PCM1-221ENST00000524203 NESP48681 1621 aa13.67□□□□□ -0.22
PCM1-221ENST00000524203 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
PCM1-221ENST00000524203 NCAPD3P42695 1498 aa13.58□□□□□ -0.24
PCM1-221ENST00000524203 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
PCM1-221ENST00000524203 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
PCM1-221ENST00000524203 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
PCM1-221ENST00000524203 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
PCM1-221ENST00000524203 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
PCM1-221ENST00000524203 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
PCM1-221ENST00000524203 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
PCM1-221ENST00000524203 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
PCM1-221ENST00000524203 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
PCM1-221ENST00000524203 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
PCM1-221ENST00000524203 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
PCM1-221ENST00000524203 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
PCM1-221ENST00000524203 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
PCM1-221ENST00000524203 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
PCM1-221ENST00000524203 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.29
PCM1-221ENST00000524203 WDR62O43379 1518 aa13.25□□□□□ -0.29
PCM1-221ENST00000524203 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
PCM1-221ENST00000524203 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
PCM1-221ENST00000524203 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
PCM1-221ENST00000524203 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
PCM1-221ENST00000524203 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
PCM1-221ENST00000524203 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
PCM1-221ENST00000524203 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
PCM1-221ENST00000524203 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
PCM1-221ENST00000524203 ARAP1Q96P48 1450 aa13□□□□□ -0.33
PCM1-221ENST00000524203 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
PCM1-221ENST00000524203 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
PCM1-221ENST00000524203 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
PCM1-221ENST00000524203 CFTRP13569 1480 aa12.85□□□□□ -0.35
PCM1-221ENST00000524203 CHD1O14646 1710 aa12.85□□□□□ -0.35
PCM1-221ENST00000524203 WIZO95785 1651 aa12.83□□□□□ -0.35
PCM1-221ENST00000524203 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
PCM1-221ENST00000524203 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
PCM1-221ENST00000524203 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
PCM1-221ENST00000524203 FBLN2P98095 1184 aa12.8□□□□□ -0.36
PCM1-221ENST00000524203 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCM1-221ENST00000524203 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
PCM1-221ENST00000524203 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
PCM1-221ENST00000524203 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
PCM1-221ENST00000524203 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
PCM1-221ENST00000524203 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
PCM1-221ENST00000524203 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
PCM1-221ENST00000524203 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
PCM1-221ENST00000524203 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
PCM1-221ENST00000524203 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
PCM1-221ENST00000524203 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
PCM1-221ENST00000524203 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
PCM1-221ENST00000524203 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
PCM1-221ENST00000524203 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
PCM1-221ENST00000524203 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
PCM1-221ENST00000524203 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
PCM1-221ENST00000524203 KIF13AQ9H1H9 1805 aa12.49□□□□□ -0.41
PCM1-221ENST00000524203 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
PCM1-221ENST00000524203 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
PCM1-221ENST00000524203 SOGA1O94964 1423 aa12.46□□□□□ -0.41
PCM1-221ENST00000524203 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
PCM1-221ENST00000524203 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
PCM1-221ENST00000524203 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
PCM1-221ENST00000524203 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
PCM1-221ENST00000524203 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
PCM1-221ENST00000524203 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
PCM1-221ENST00000524203 KDM6BO15054 1643 aa12.35□□□□□ -0.43
PCM1-221ENST00000524203 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
PCM1-221ENST00000524203 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
PCM1-221ENST00000524203 HECW2Q9P2P5 1572 aa12.33□□□□□ -0.44
PCM1-221ENST00000524203 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
PCM1-221ENST00000524203 ADGRL1O94910 1474 aa12.27□□□□□ -0.44
PCM1-221ENST00000524203 DIP2BQ9P265 1576 aa12.27□□□□□ -0.44
PCM1-221ENST00000524203 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
PCM1-221ENST00000524203 TSPOAP1O95153 1857 aa12.26□□□□□ -0.45
PCM1-221ENST00000524203 GRIN2AQ12879 1464 aa12.26□□□□□ -0.45
PCM1-221ENST00000524203 CUX1P39880 1505 aa12.26□□□□□ -0.45
PCM1-221ENST00000524203 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
PCM1-221ENST00000524203 NUP160Q12769 1436 aa12.23□□□□□ -0.45
PCM1-221ENST00000524203 MAPKBP1O60336 1514 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms