RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
NECAB1-206ENST00000523962 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
NECAB1-206ENST00000523962 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
NECAB1-206ENST00000523962 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
NECAB1-206ENST00000523962 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
NECAB1-206ENST00000523962 ABCC9O60706 1549 aa22.47■■□□□ 1.19
NECAB1-206ENST00000523962 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
NECAB1-206ENST00000523962 FOXD1Q16676 465 aa22■■□□□ 1.11
NECAB1-206ENST00000523962 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
NECAB1-206ENST00000523962 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
NECAB1-206ENST00000523962 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
NECAB1-206ENST00000523962 NACADO15069 1562 aa20.99■□□□□ 0.95
NECAB1-206ENST00000523962 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
NECAB1-206ENST00000523962 MSH5O43196 834 aa20.78■□□□□ 0.92
NECAB1-206ENST00000523962 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
NECAB1-206ENST00000523962 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
NECAB1-206ENST00000523962 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
NECAB1-206ENST00000523962 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
NECAB1-206ENST00000523962 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
NECAB1-206ENST00000523962 PIAS4Q8N2W9 510 aaPredicted RBP20.51■□□□□ 0.87
NECAB1-206ENST00000523962 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
NECAB1-206ENST00000523962 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
NECAB1-206ENST00000523962 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
NECAB1-206ENST00000523962 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
NECAB1-206ENST00000523962 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
NECAB1-206ENST00000523962 ADRA2BP18089 450 aa20.21■□□□□ 0.83
NECAB1-206ENST00000523962 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
NECAB1-206ENST00000523962 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
NECAB1-206ENST00000523962 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
NECAB1-206ENST00000523962 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
NECAB1-206ENST00000523962 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
NECAB1-206ENST00000523962 CUX2O14529 1486 aa19.43■□□□□ 0.7
NECAB1-206ENST00000523962 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
NECAB1-206ENST00000523962 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
NECAB1-206ENST00000523962 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
NECAB1-206ENST00000523962 NESP48681 1621 aa19.2■□□□□ 0.66
NECAB1-206ENST00000523962 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
NECAB1-206ENST00000523962 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
NECAB1-206ENST00000523962 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
NECAB1-206ENST00000523962 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
NECAB1-206ENST00000523962 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
NECAB1-206ENST00000523962 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
NECAB1-206ENST00000523962 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
NECAB1-206ENST00000523962 THOC2Q8NI27 1593 aaKnown RBP18.95■□□□□ 0.62
NECAB1-206ENST00000523962 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
NECAB1-206ENST00000523962 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
NECAB1-206ENST00000523962 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
NECAB1-206ENST00000523962 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
NECAB1-206ENST00000523962 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
NECAB1-206ENST00000523962 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
NECAB1-206ENST00000523962 WDR62O43379 1518 aa18.68■□□□□ 0.58
NECAB1-206ENST00000523962 OSCARQ8IYS5 282 aa18.65■□□□□ 0.58
NECAB1-206ENST00000523962 WIZO95785 1651 aa18.65■□□□□ 0.58
NECAB1-206ENST00000523962 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
NECAB1-206ENST00000523962 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
NECAB1-206ENST00000523962 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
NECAB1-206ENST00000523962 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
NECAB1-206ENST00000523962 CFTRP13569 1480 aa18.56■□□□□ 0.56
NECAB1-206ENST00000523962 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
NECAB1-206ENST00000523962 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
NECAB1-206ENST00000523962 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
NECAB1-206ENST00000523962 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
NECAB1-206ENST00000523962 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
NECAB1-206ENST00000523962 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
NECAB1-206ENST00000523962 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
NECAB1-206ENST00000523962 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
NECAB1-206ENST00000523962 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
NECAB1-206ENST00000523962 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
NECAB1-206ENST00000523962 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
NECAB1-206ENST00000523962 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
NECAB1-206ENST00000523962 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
NECAB1-206ENST00000523962 FBLN2P98095 1184 aa18.16■□□□□ 0.5
NECAB1-206ENST00000523962 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
NECAB1-206ENST00000523962 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
NECAB1-206ENST00000523962 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
NECAB1-206ENST00000523962 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
NECAB1-206ENST00000523962 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
NECAB1-206ENST00000523962 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
NECAB1-206ENST00000523962 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
NECAB1-206ENST00000523962 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
NECAB1-206ENST00000523962 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
NECAB1-206ENST00000523962 SOGA1O94964 1423 aa18■□□□□ 0.47
NECAB1-206ENST00000523962 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
NECAB1-206ENST00000523962 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
NECAB1-206ENST00000523962 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
NECAB1-206ENST00000523962 CHD1O14646 1710 aa17.96■□□□□ 0.47
NECAB1-206ENST00000523962 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
NECAB1-206ENST00000523962 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
NECAB1-206ENST00000523962 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
NECAB1-206ENST00000523962 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
NECAB1-206ENST00000523962 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
NECAB1-206ENST00000523962 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
NECAB1-206ENST00000523962 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
NECAB1-206ENST00000523962 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
NECAB1-206ENST00000523962 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
NECAB1-206ENST00000523962 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
NECAB1-206ENST00000523962 CUX1P39880 1505 aa17.79■□□□□ 0.44
NECAB1-206ENST00000523962 SYNJ2O15056 1496 aa17.78■□□□□ 0.44
NECAB1-206ENST00000523962 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
NECAB1-206ENST00000523962 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms